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# Adapted from following:

# - Rocker RStudio container using new versioned paradigm: https://github.com/rocker-org/rocker-versioned2/blob/master/dockerfiles/Dockerfile_rstudio_4.0.2

# - license: GPLV2

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FROM rocker/r-ver:4.2.1

ARG S6_VERSION

ARG RSTUDIO_VERSION

ARG QUARTO_VERSION

ENV S6_VERSION=$S6_VERSION

ENV RSTUDIO_VERSION=$RSTUDIO_VERSION

ENV PATH=/usr/lib/rstudio-server/bin:$PATH

ENV QUARTO_VERSION=$QUARTO_VERSION

# key dependencies for certain R packages

RUN apt-get update \

&& export DEBIAN_FRONTEND=noninteractive \

&& apt-get -y install --no-install-recommends software-properties-common curl wget libssl-dev libxml2-dev libsodium-dev imagemagick libmagick++-dev libgit2-dev libssh2-1-dev zlib1g-dev librsvg2-dev libudunits2-dev libcurl4-openssl-dev python3-pip pandoc libzip-dev libfreetype6-dev libfontconfig1-dev tk libpq5 libxt6 openssh-client openssh-server \

&& apt-get autoremove -y && apt-get clean -y && rm -rf /var/lib/apt/lists/*

RUN /rocker_scripts/install_rstudio.sh

RUN /rocker_scripts/install_pandoc.sh

RUN /rocker_scripts/install_quarto.sh

# install key dependencies of certain packages that could be installed later

RUN apt-get update \

&& export DEBIAN_FRONTEND=noninteractive \

&& apt-get -y install --no-install-recommends libxml2-dev libsodium-dev libssl-dev imagemagick libmagick++-dev libgit2-dev libssh2-1-dev zlib1g-dev librsvg2-dev libudunits2-dev libfontconfig1-dev libfreetype6-dev curl

RUN echo "RENV_PATHS_CACHE=/renv/cache" >> /usr/local/lib/R/etc/Renviron

# [Optional] Uncomment this section to add addtional system dependencies needed for project

# RUN apt-get update \

# && export DEBIAN_FRONTEND=noninteractive \

# && apt-get -y install --no-install-recommends ---packages list----

# [Optional] Uncomment this section to install additional R packages.

RUN install2.r --error --skipinstalled --ncpus -1 renv remotes

EXPOSE 8787

CMD ["/init"]