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benchmark_rank.py
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29 lines (21 loc) · 1019 Bytes
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import numpy as np
from skimage.filters import rank
from skimage.filters.rank import __all__ as all_rank_filters
from skimage.filters.rank import __3Dfilters as all_3d_rank_filters
from skimage.morphology import disk, ball
class RankSuite:
param_names = ["filter_func", "shape"]
params = [sorted(all_rank_filters), [(32, 32), (256, 256)]]
def setup(self, filter_func, shape):
self.image = np.random.randint(0, 255, size=shape, dtype=np.uint8)
self.footprint = disk(1)
def time_filter(self, filter_func, shape):
getattr(rank, filter_func)(self.image, self.footprint)
class Rank3DSuite:
param_names = ["filter3d", "shape3d"]
params = [sorted(all_3d_rank_filters), [(32, 32, 32), (128, 128, 128)]]
def setup(self, filter3d, shape3d):
self.volume = np.random.randint(0, 255, size=shape3d, dtype=np.uint8)
self.footprint_3d = ball(1)
def time_3d_filters(self, filter3d, shape3d):
getattr(rank, filter3d)(self.volume, self.footprint_3d)