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Commits on Jun 1, 2025

• Released seqtk-1.5 (r133)

  lh3

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Commits on Aug 10, 2024

• r132: add +/- suffix for seq -R

  lh3

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• r131: add seq -R to output both strands

  lh3

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Commits on May 19, 2023

• r130: added telo -P

  lh3

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• suppress warnings about printf format

  lh3

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• Merge pull request #192 from c-zhou/master

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• Merge branch 'master' into master

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• forgot to add this

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• Released seqtk-1.4 (r122)

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Commits on May 18, 2023

• light comments on telo

  lh3

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• avoid potential overlaps

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• r121: fixed a bug in telo

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• r120: added telo for identifying telomeres

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Commits on Feb 16, 2023

• r119: added "size" for #reads and tot length

  lh3

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Commits on Jun 3, 2022

• support >2G sequences

  

  Chenxi Zhou

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Commits on May 15, 2022

• option to convert lowercase to N

  lh3

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Commits on Mar 23, 2021

• expose "split" to command line help

  lh3

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Commits on Dec 4, 2020

• r116: strand-aware subseq (feature incomplete)

  lh3

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Commits on Jun 10, 2020

• r115: added the hpc command

  lh3

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Commits on Jan 20, 2020

• r114: added the split command

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Commits on Jan 6, 2020

• r113: changed the default gap size to 50 in "gap"

  lh3

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Commits on Oct 6, 2019

• Merge branch 'master' of github.com:lh3/seqtk

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• r107: output gap positions

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Commits on Feb 19, 2019

• Merge pull request #131 from cjain7/master

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Commits on Feb 18, 2019

• Type conversion from void* to unsigned char*

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Commits on Nov 21, 2018

• Merge pull request #123 from kloetzl/master

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  lh3

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• improve parsing performance

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Commits on Jun 18, 2018

• Released seqtk-1.3 (r106)

  lh3

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• resolved #103 (make install BINDIR=$HOME/bin)

  lh3

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Commits on Jun 17, 2018

• r104: resolved #114

  lh3

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• r103: fixed #111

  lh3

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Commits on Nov 7, 2017

• r102: added -F, fake qual to seq

  lh3

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Commits on Feb 11, 2017

• r101: smarter fastq check with kseq.h support

  lh3

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• reformat kseq.h; added fastq flag

  lh3

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• updated to the latest kseq.h for err checking

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