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NF_MAAgilent1ch: Update pipeline version from GL-DPPD-7112 to GL-DPPD-7112-A #140

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NF_MAAgilent1ch: Update pipeline version from GL-DPPD-7112 to GL-DPPD-7112-A #140

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3005d1a
NF_MAAgilent1ch: pass workflow version to qmd
cyouh95 Feb 11, 2025
31a118e
NF_MAAgilent1ch: pass ensembl version to qmd
cyouh95 Feb 11, 2025
ffaa0ae
NF_MAAgilent1ch: use annotation file passed to qmd
cyouh95 Feb 11, 2025
09384c5
NF_MAAgilent1ch: remove visualization_PCA_table_GLmicroarray.csv output
cyouh95 Feb 11, 2025
1641c3c
NF_MAAgilent1ch: update qmd structure
cyouh95 Feb 11, 2025
6a72622
NF_MAAgilent1ch: #104 add --skipDE option
cyouh95 Feb 13, 2025
5a82d67
NF_MAAgilent1ch: support custom annotations
cyouh95 Feb 25, 2025
cbe2515
NF_MAAgilent1ch: update protocol
cyouh95 Feb 25, 2025
5a7d4a8
NF_MAAgilent1ch: update pipeline documentation
cyouh95 Feb 27, 2025
310f1dd
NF_MAAgilent1ch: update images
cyouh95 Feb 27, 2025
3c4dce9
NF_MAAgilent1ch: update pipeline version from GL-DPPD-7112 to GL-DPPD…
cyouh95 Feb 27, 2025
0464af5
NF_MAAgilent1ch: update accepted ISA field name for label
cyouh95 Mar 4, 2025
0ead0df
NF_MAAgilent1ch: update workflow version from 1.0.4 to 1.0.5
cyouh95 Mar 4, 2025
c9b2739
NF_MAAgilent1ch: update CHANGELOG.md
cyouh95 Mar 4, 2025
c86e746
NF_MAAgilent1ch: update custom functions in pipeline doc
cyouh95 Mar 25, 2025
ede2db1
NF_MAAgilent1ch: update nextflow version from 23.10.1 to 24.10.5
cyouh95 Mar 25, 2025
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2 changes: 2 additions & 0 deletions Microarray/Agilent_1-channel/Array_Annotations/Agilent_array_annotations.csv
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Original file line number Diff line number Diff line change
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array_design,annot_type,annot_filename,download_link,download_date
AGILENT SurePrint G3 GE 8x60k v3,agilent,072363_D_AA_20240521.txt,https://earray.chem.agilent.com/earray/array/displayViewArrayDesign.do?eArrayAction=view&arraydesignid=ADID40392,2024-11-15
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