Looks like I won't have to wait long for the dir globbing -- I'm having problems getting it working though :
Here is my Channel declaration 👍
samps = Channel.path('/data/bifx/Sequence_data/TXOME/Project*/*', type:'dir')
and here's what happens when I try to run it:
[root@szdedicated /data/bifx/tlaurent/trinity_wd]# ./nextflow run_trinity.nf
N E X T F L O W ~ version 0.7.3
ERROR: groovy.lang.MissingMethodException: No signature of method: static nextflow.Channel.path() is applicable for argument types: (java.util.LinkedHashMap, java.lang.String) values: [[type:dir], /data/bifx/Sequence_data/TXOME/Project*/*]
Possible solutions: path(java.lang.String), path(java.lang.Object), path(java.util.regex.Pattern), watch(java.lang.String), watch(java.lang.String, java.lang.String), watch(java.util.regex.Pattern, java.lang.String) -- See the file '.nextflow.log' for more error details
BTW I did pull the new package again:
Thanks,
Looks like I won't have to wait long for the dir globbing -- I'm having problems getting it working though :
Here is my Channel declaration 👍
and here's what happens when I try to run it:
BTW I did pull the new package again:
Thanks,