name: Unit Tests

on:
  push:
  pull_request:
  schedule:
      - cron: '00 4 * * *'  # daily at 4AM

jobs:
  build:

    runs-on: ubuntu-latest
    strategy:
      matrix:
        python-version: ['3.9', '3.10', "3.11", "3.12"]
        optional-deps: ['no-extras', 'extras']
      fail-fast: false
    steps:

    - uses: actions/checkout@v3
      with:
        fetch-depth: 0

    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v4
      with:
        python-version: ${{ matrix.python-version }}

    - name: Install test requirements
      shell: bash -l {0}
      run: |
        set -vxeuo pipefail
        python -m pip install -v .
        if [[ ${{ matrix.optional-deps }} = extras ]]; then
          python -mpip install av jinja2 jpype1 matplotlib moviepy scikit-image tifffile
        fi
        python -m pip install coverage pytest
        python -m pip list

    - name: Test with pytest
      shell: bash -l {0}
      run: |
        set -vxeuo pipefail
        python -c 'import pims.bioformats; pims.bioformats.download_jar()'
        coverage run -m pytest -svra
        coverage report

    - name: Upload code coverage
      uses: codecov/codecov-action@v3