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@statgen

Center for Statistical Genetics

The Center for Statistical Genetics at the University of Michigan School of Public Health

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  1. pheweb pheweb Public

    A tool to build a website to browse hundreds or thousands of GWAS.

    Python 188 74

  2. locuszoom locuszoom Public

    A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.

    JavaScript 163 30

  3. demuxlet demuxlet Public

    Genetic multiplexing of barcoded single cell RNA-seq

    C++ 130 26

  4. SLURM-examples SLURM-examples Public

    Python 94 28

  5. bamUtil bamUtil Public

    C++ 92 30

  6. Minimac4 Minimac4 Public

    C++ 70 25

Repositories

Showing 10 of 115 repositories
  • cloudgene3 Public Forked from genepi/cloudgene3

    A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.

    statgen/cloudgene3’s past year of commit activity
    Java 0 MIT 7 0 0 Updated Oct 31, 2025
  • imputationserver2 Public Forked from genepi/imputationserver2

    Imputation Server 2 workflow to facilitate genotype imputation at scale.

    statgen/imputationserver2’s past year of commit activity
    Nextflow 0 MIT 12 0 0 Updated Oct 31, 2025
  • imputationserver-utils Public Forked from genepi/imputationserver-utils
    statgen/imputationserver-utils’s past year of commit activity
    Java 0 MIT 4 0 0 Updated Oct 30, 2025
  • tis-v2-docs Public

    User-facing documentation for the TOPMed Imputation Server v2 (Nextflow edition)

    statgen/tis-v2-docs’s past year of commit activity
    0 0 0 0 Updated Oct 28, 2025
  • imputationserver Public Forked from genepi/imputationserver

    TOPMED Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves user experience and productivity

    statgen/imputationserver’s past year of commit activity
    Java 6 AGPL-3.0 50 0 0 Updated Oct 20, 2025
  • topmed-methylation-qtl Public

    PIpeline for TOPMed methylation QTL analysis.

    statgen/topmed-methylation-qtl’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 11, 2025
  • savant Public

    Sparse Allele Vector AssociatioN Tool

    statgen/savant’s past year of commit activity
    C++ 0 MPL-2.0 0 0 0 Updated Oct 11, 2025
  • bravo_vue Public

    BRAVO's Vue JS based UI.

    statgen/bravo_vue’s past year of commit activity
    Vue 0 0 13 16 Updated Sep 16, 2025
  • pheweb Public

    A tool to build a website to browse hundreds or thousands of GWAS.

    statgen/pheweb’s past year of commit activity
    Python 188 MIT 74 39 2 Updated Sep 11, 2025
  • bravo_data_prep Public

    Work flows and tools to create data that backs the BRAVO API.

    statgen/bravo_data_prep’s past year of commit activity
    C++ 0 MIT 2 8 0 Updated Sep 9, 2025
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