Expanding task_template with arbitrary keyword arguments #7
Description
task: mem='1G', cores=1, walltime='1m', modules=['R/3.6.1', 'anaconda3/2019.10']
with task_template
#!/bin/bash
#PBS -N {task}
#PBS -l nodes={nodes}:ppn={ppn}
#PBS -l walltime={walltime}
#PBS -l mem={mem//10**9}GB
#PBS -o /home/{user_name}/.sos/tasks/{task}.out
#PBS -e /home/{user_name}/.sos/tasks/{task}.err
#PBS -m ae
#PBS -M email@address
#PBS -v {workdir}
module load {' '.join(modules)}
{command}
does not work because keyword argument modules is not passed to template. As far as I remember, it was designed to work.