Lesson 1: Introduction To Microbiology Learning Content Nomenclature of Microoganisms Carolus Linnaeus
Lesson 1: Introduction To Microbiology Learning Content Nomenclature of Microoganisms Carolus Linnaeus
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY - LECTURE
PRONUNCIA SOURCE OF SOURCE OF
TION GENUS NAME SPECIFIC
whereas its specific epithet, coli, reminds us that E.
EPITHET
Salmonella coli live in theHonors
sal'mo- colon, or large intestine.
public Found in the
TYPES OF MICROORGANISMS
enterica NELlah en- health intestines
Bacteria (singular: bacterium)
(bacterium) TER-ikah microbiologist (entero-)
Daniel Salmon
Relatively simple, single-celled (unicellular) organisms. Because their genetic material is not enclosed in a special nuclear membrane, bacterial cells
are called prokaryotes. Prokaryotes include both bacteria and archaea.
Bacteria are enclosed in cell walls that are largely composed of a carbohydrate and protein complex called
peptidoglycan in contrast to plant cell wall cellulose is the main substance.
Penicillium pen'i-SIL- Bacteria generally
Tuftlike or reproduce by dividing ainto two equal cells; this process is called binary fission.
Produces
chrysogenum leum kri-S0 paintbrush yellow (chryso-)
(fungus) jenum (penicill-) pigment
appearance
microscopically
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY
- LECTURE
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY - LECTURE
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY
- LECTURE
1. Bacteria (cell walls contain a protein-
Viruses carbohydrate complex called
peptidoglycan)
They are so small that most can be seen only with an electron
2. Archaea (cell walls, if present, lack peptidoglycan)
microscope, and they are acellular (not cellular).
Virus particle contains a core made of only one type of nucleic
3. Eukarya, which includes the following:
acid, either DNA or RNA. This core is surrounded by a protein
coat. Sometimes the coat is encased by an additional layer, a lipid o Protists (slime molds, protozoa, and algae) o Fungi
membrane called an envelope. (unicellular yeasts, multicellular molds, and mushrooms)
Viruses are considered to be living when they multiply within host o Plants (includes mosses, ferns, conifers, and flowering
cells they infect. On the other hand, viruses are not considered to plants)
be living because outside living hosts, they are inert. o Animals (includes sponges, worms, insects, and
vertebrates)
Multicellular Animal Parasites
TYPES OF MICROORGANISMS
Multicellular animal parasites are not strictly microorganisms but
they are of medical importance. a) The rod-shaped bacterium Haemophilus influenzae.
Animals are eukaryotes. The two major groups of parasitic worms b) Mucor, a common bread mold, is a type of fungus.
are the flatworms and the roundworms, collectively called c) An ameba, a type of protozoan.
helminths. d) The pond alga Volvox.
CLASSIFICATION OF MICROORGANISMS e) Zika virus (ZikV).
All organisms were grouped into either the animal kingdom or the
plant kingdom.
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY - LECTURE
The period from 1857 to 1914 has been named the First Golden
Age of Microbiology. During this productive period,
microbiologists studied the chemical activities of microorganisms,
improved the techniques for performing microscopy and culturing
microorganisms, and developed vaccines and surgical
techniques.
The Second Golden Age of Microbiology
After the relationship between microorganisms and disease was
established, medical microbiologists next focused on the search
for substances that could destroy pathogenic microorganisms
without damaging the infected animal or human.
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1892 Winogradsky Sulfur cycle Robert Koch
CLINICAL BACTERIOLOGY
1898 -Shiga
LECTURE Shigella (1843-1910)
dysenteriae
1908 Ehrlich Syphilis Established
treatment experimental
1910 Chagas Trypanosoma steps for directly
cruzi linking a specific
1911 Rous Tumor causing microbe to a
virus (1966 specific disease
Nobel Prize
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
FIRST GOLDEN AGE OF MICROBIOLOGY
1857 Pasteur Fermentation CLINICAL BACTERIOLOGY - LECTURE
1861 Pasteur Disproved
spontaneous
generation Louis Pasteur
1864 Pasteur Pasteurization (1822-1895) -
1867 Lister Aseptic surgery Demonstrated
1876 Koch Germ theory of that life did not
disease arise
1879 Neisser Neisseria spontaneously
gonorrhoeae from nonliving
matter.
1881 Koch • Yellow fever
Finlay • Pure cultures
1882 Koch Mycobacterium
tuberculosis
1883 Koch Vibrio cholerae
1884 • Metchnikoff • Phagocytosis
Joseph Lister
• Gram • Gram- (1827-1912)
staining Performed
procedure surgery under
• Escherich • Escherichia aseptic
coli conditions using
1887 Petri Petri dish phenol. Proved
1889 Kitasato Clostridium tetani that microbes
1890 • von • Diphtheria caused surgical
Bering antitoxin wound infections.
• Ehrlich • Theory of
immunity
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY
- LECTURE
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY - LECTURE
SECOND GOLDEN AGE OF MICROBIOLOGY 1980s Sanger and Techniques for virus in a patient
Gilbert sequencing DNA with swollen
1940s Fleming, Penicillin César Milstein
lymph nodes, the
Chain, and (1927-)
virus was human
Florey Fused cancerous
immunodeficiency
1950s Waksman Streptomycin cells with
virus.
H. Krebs Chemical steps antibodyproducing
of the Krebs cells to produce a
cycle hybrid cell that
Jerne, Technique for
grows
Enders, Poliovirus Köhler, and producing
continuously and
Weller, and cultured in cell Milstein monoclonal Youyou Tu
produces
Robbins cultures (single pure) (1930-)
therapeutic
antibodies
antibodies.
Beadle and Genetic control Tonegawa Genetics of Extracted
Tatum of biochemical antibody artemisinin from a
reactions production Chinese sage
Bishop and Cancer-causing plant Artemisinin
1960s Medawar Acquired immune Françoise Barré- Varmus- genes inhibits the
Sinoussi (1947-) (oncogenes) malaria parasite
tolerance
Discovered a
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY - LECTURE
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY - LECTURE
disease (1543)
1590- Jansen develops first useful Shakespeare’s Hamlet
1608 compound microscope (16001601)
1858 Virchow states that all cells come from Darwin’s On the 1885 Pasteur develops rabies vaccine First motor vehicles
cells origin of Species Escherich discovers Escherichia coli, a developed by Daimler
(1859) cause of diarrhea (1885-1886)
1861 Pasteur shows that microorganisms do American Civil War 1886 Fraenkel discovers Streptococcus
not arise by spontaneous generation (1861-1865) pneumoniae, a cause of pneumonia
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY - LECTURE
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY - LECTURE
1903 Wright and others discover antibodies First powered aircraft 1931 Van Niel shows that photosynthetic
in the blood of immunized animals (1903) bacteria use reduced compounds as
1905 Schaudinn and Hoffmann show Einstein’s special electron donors without producing
Treponema pallidum cause syphylis theory of relativity oxygen
(1905) 1933 Ruska develops first transmission Hitler becomes
1906 Wassermann develops complement electron microscope chancellor of
fixation test for syphylis Germany (1933)
1909 Ricketts shows that Rocky Mountain First model T Ford 1935 Stanley crystalizes the tobacco mosaic
spotted fever is transmitted by ticks and (1908) virus
caused by a microbe (Rickettsia Peary and Hensen Domagk discovers sulfa drugs
ricketsii) reach North Pole 1937 Chatton divides living organisms into Krebs discovers the
(1909) procaryotes and eucaryotes citric acid cycle
1910 Ehrlich develops chemotherapeutic Rutherford presents (1937)
World War II begins
agent for syphylis his theory of the atom (1939)
(1911)
1911 Rous discovers a virus that causes Picasso and cubism 1941 Beadle and Tatum, one-gene-
cancer in chickens (1912) oneenzyme hypothesis
World War I begins 1944 Avery shows that DNA carries The insecticide DDT
(1914) introduced (1944)
information during transformation
1915- D’Herelle and Twort discover bacterial Einstein’s general Waksman discovers streptomycin
1917 viruses theory of relativity Atomic bombs
(1916) dropped on
Russian revolution Hiroshima and
(1917) Nagasaki (1945)
1921 Fleming discovers lysozyme 1946 Lederberg and Tatum describe United Nations
1923 First edition of Bergey’s Manual Lindberg’s bacterial conjugation formed (1945) First
transatlantic flight electronic
(1927) computer (1946)
1928 Griffith discovers bacterial 1949 Enders, Weller, and Robbins grow
transformation poliovirus in human tissue cultures
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY - LECTURE
1929 Fleming discovers penicillin Stock market crash 1950 Lwoff induces lysogenic Korean War begins
(1929) bacteriophages (1950)
1952 Hershey and Chase show that First hydrogen bomb 1970 Discovery of restriction endonucleases
bacteriophages inject DNA into host exploded (1952) by Arber and Smith
cells Stalin dies (1952) Discovery of reverse transcriptase in
Zinder and Lederberg discover retroviruses by Temin and Baltimore
First commercial
generalized transduction 1973 Ames develops a bacterial assay for Salt I treaty (1972)
transistorized
the detection of mutagens Vietnam war ends
product (1952)
Cohen, Boyer, Chang, and Helling use (1973)
1953 Phase-contrast microscope developed U.S Supreme Court plasmid vectors to clone genes in
Medawar discovers immune tolerance rules against bacteria
Watson and Crick propose the double segregated schools
helix structure for DNA 1975 Kohler and Milstein develop technique President Nixon
(1954)
for the production monoclonal resigns because of
1955 Jacob and Wollman discover the F Montgomery bus antibodies Watergate cover-up
factor is a plasmid boycott (1955) Lyme disease discovered (1974)
Jerne and Burnet propose the clonal Sputnik launched by
section theory Soviet Union (1957) 1977 Recognition of archaea as a distinct Panama Canal
1959 Yalow develops the radioimmunoassay Birth control pill microbial group by Woese and Fox Treaty (1977)
technique (1960) 1979 Gilbert and Sanger develop techniques Hostages seized in
1961 Jacob and Manod propose the operon First Humans in for DNA sequencing Iran (1978) Three
model of gene regulation space (1961) Insulin synthesized using recombinant Mile Island
1961- Nirenberg, Khorana, and others Cuban missile crisis DNA techniques disaster 1979
1966 elucidate the genetic code (1962) Smallpox declared officially eliminated
Nuclear test ban 1980 Development or the scanning tunneling Home computers
treaty (1963) microscope marketed (1980)
1962 Porter proposes the basic structure for Civil Rights march on
immunoglobulin G Washington (1963) 1982 Recombinant hepatitis B vaccine AIDS first recognized
First quinolone antimicrobial (nalidixic President Kennedy developed (1981)
acid) synthesized assassinated (1963)
Arab-Israeli War
1982- Discovery of catalytic RNA by Cech First artificial heart
(1967)
1983 and Altman implanted (1982)
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY - LECTURE
Martin Luther King 1983- The human immunodeficiency virus Meter redefined in
assassination (1968) 1984 isolated and identified by Gallo and terms of distance
Neil Armstrong walks Montagnier light travels (1983)
The polymerase chain reaction
on the moon (1969)
developed by Mullis
MODERN DEVELOPMENT IN MICROBIOLOGY
The groundwork laid during the Golden Age of Microbiology provided the basis for several monumental achievements during the twentieth century.
New branches of microbiology were developed, including immunology and virology. Most recently, the development of a set of new methods
called recombinant DNA technology has revolutionized research and practical applications in all areas of microbiology.
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
1986 First vaccine (hepatitis B vaccine) Gorbachev becomes
produced by genetic engineering Communist party
CLINICAL BACTERIOLOGY - LECTURE
general secretary
approved for human use Bacteriology
(1985)
Berlin Wall falls The study of bacteria. Began with van Leeuwenhoek's first examination of
(1989)
tooth scrapings.
1990 First human gene-therapy testing Persian Gulf War
begun with Iraq begins One intriguing discovery came in 1997, when Heide Schulz discovered a
(1990) Soviet bacterium large enough 10 be seen with the unaided eye (0.2 mm wide).
Union collapse; This bacterium, which she named Thiomargarita namibiensis, lives in the
Boris Yeltsin mud on the African coast. The bacterium consumes hydrogen sulfide,
comes to power Mycology
(1991) which would be toxic to mud-dwell ing animals.
1992 First human trials of antisense therapy
1995 Chickenpox vaccine approved for U.S The study of fungi. Includes medical, agricultural, and ecological branches.
use Fungal infection rates have been rising during the past decade,
Haemophilus influenzae genome accounting for 10% of hospital-acquired infections.
sequenced
1996 Methanococcus jannaschii genome Water found on the P arasitology
sequenced moon (1998)
Yeast genome sequenced Is the study of protozoa and parasitic worms.
1997 Discovery of Thiomargarita
namibiensis, the largest known
bacterium
Escherichia coli genome sequenced
2000 Discovery that Vibrio cholerae has two
separate chromosomes
Immunolog 1933, when Rebecca Lancefield proposed that streptococci be
y classified according to serotypes (variants within a species) based
The study of immunity. Jenner's first vaccine in 1796. Vaccines are on certain components in the cell walls of the bacteria.
now available for numerous diseases, including measles, rubella Streptococci are responsible for a variety of diseases, such as
(German measles), mumps, chickenpox, pneumococcal sore throat (strep throat), streptococcal toxic shock, and
pneumonia, tetanus, tuberculosis, influenza, whooping cough, septicemia.
polio, and hepatitis B. A major advance in immunology occurred in
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY - LECTURE
Virology In the late 1960s, Paul Berg showed that fragments of human or
animal DNA (genes) that code for important proteins can be
The study of viruses. Originated during the Golden Age of
attached to bacterial DNA.
Microbiology.
The resulting hybrid was the first example of recombinant DNA.
In 1892, Dmitri Iwanowski reported that the organism that caused
When recombinant DNA is inserted into bacteria (and other
mosaic disease of tobacco was so small that it passed through
microbes), it can be used to make large quantities of the desired
filters fine enough to stop all known bacteria. At the time,
protein.
Iwanowski was not aware that the organism in question was a
virus in the sense that we now understand the term. In 1935, The technology that developed from this technique is called
Wendell Stanley demonstrated that the organism, called tobacco recombinant DNA technology, and it had its origins in two related
mosaic virus (TMV), was fundamentally different from other fields. The first, microbial genetics, studies the mechanisms by
microbes and so simple and homogeneous that it could be which microorganisms inherit traits. The second, molecular
crystallized like a chemical compound. Stanley's work facilitated biology, specifically studies how genetic information is carried in
the study of viral structure and chemistry. molecules of DNA and how DNA directs the synthesis of proteins
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY - LECTURE
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
CLINICAL BACTERIOLOGY - LECTURE
David described how RNA Susumu 1987 Japan Described the genetics
imore viruses could cause Tonegawa of antibody production
cancer
iel Nathans, 1978 United States Described the action Johann 1988 Germany Described the
milton Smith, United States of restriction enzymes Deisenhofer, structure of bacterial
Werner Arber Switzerland (now used in Robert Huber, and photosynthetic
recombinant DNA Hartmut pigments
technology) Michel
er Mitchell 1978 England Described the J. Michael Bishop 1989 United States Discovered
chemiosmotic and cancercausing genes
mechanism for ATP Harold E. Varmus called oncogenes
synthesis Joseph E. Murray 1990 United States Performed the first
l Berg 1980 United States Performed and E. Donnall successful organ
experiments in gene Thomas transplants by using
splicing immune-suppressive
on Klug 1982 South Africa Described the agents
structure of tobacco Edmand H. Fisher 1992 United States Discovered protein
mosaic virus (TMV) and Edwin G. kinases, enzymes that
bara 1983 United States Discovered Krebs regulate cell growth
Clintock transposons (small Richard J. 1993 Great Britain Discovered that a
segments of DNA that Roberts and United States gene can be
can move from one Phillip A. Sharp separated onto
region of a DNA different segments of
molecule to another) DNA
ar Milstein, 1984 Argentina Developed a Kary B. Mullis 1993 United States Discovered the
rges J.F. Germany technique for polymerase chain
ler, and Denmark producing monoclonal
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)
reaction to amplify
(make
CLINICAL BACTERIOLOGY
Andrew Fire and - 2006
LECTURE
United States Discovered RNA
multiple copies of) Craig Mello interference (RNA), or
DNA gene silencing, by
Peter C. 1996 Australia Discovered how double-stranded RNA
Doherty and Switzerland cytotoxic T cells Harald zur 2008 Germany Discovered that
Rolf M. recognize Hausen human papilloma
Zinkernagel virusinfected calls viruses cause cervical
prior to destroying cancer
them Française 2008 France Discovered human
Stanley B. 1997 United Discovered and BarréSinoussi immunodeficiency
Prusiner States named and Luc virus (HIV)
proteinaceous Montagnier
infectious particles *** END OF LESSON 1 ***
(prions) and
demonstrated a
relationship between
prions and deadly
neurological
diseases in humans
and animals
Peter Agre and 2003 United Discovered water
Roderick States and ion channels in
MacKirron plasma membranes
Aaron 2004 Israel Discovered how
Ciechanover, Israel cells dispose of
Avram Hershko, United unwanted
and Irwin Rose States proteins in
proteasome!
Barry Marshall 2005 Australia Discovered that
and J. Robin Helicobacter pylori
Warren causes peptic ulcers
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Kyla Yvette Aducayen - Bachelor of Science in Medical Technology (Year 2)