Genetic Aspects of The Worldwide Colonization Process of Ceratitis Capitata
Genetic Aspects of The Worldwide Colonization Process of Ceratitis Capitata
Multilocus enzyme electrophoresis data from 26 polymorphic loci (124 alleles) were
used to analyze the genetic aspects of the worldwide colonization of Ceratitis cap-
itata (medfly). Eighty-two samples of 17 populations were collected from six
regions throughout the species range: Africa, extra-Mediterranean islands (Madeira
and Gran Canaria), Mediterranean region, Latin America (Guatemala), Pacific (Ha-
waii), and Australia. The variability parameters (H, P, A) reveal that the geographical
dispersal of medfly from its ancestral source area (East Africa) is associated with
a great reduction in variability. The pattern of decreasing variability occurs at two
regional levels: in the African–Mediterranean region where the differentiation is
gradual, and in the Latin American–Pacific region where some ancestral variability
is still present as a consequence of recent colonization. The UPGMA phylogenetic
tree, derived from Nei’s genetic distances, shows the presence of intraspecific dif-
ferentiative processes affecting mainly the two island populations, Réunion and
Hawaii. The population genetic changes observed in the species range are consis-
tent with both the chronology and the historical circuitous course of the medfly
colonization process.
The Mediterranean fruit fly (medfly) (Cer- al. 1991; Malacrida et al. 1992) and DNA
atitis capitata) is a fast-colonizing species variation ( Baruffi et al. 1995; Gasparich et
which in the last 100 years has spread al. 1995; Gomulski et al. 1996; Haymer and
from its supposed origin in tropical Africa McInnis 1994; McPheron et al. 1994). From
to a number of countries including the these previous studies it has been possi-
Mediterranean basin, parts of South and ble to suggest an African origin for this
From the Dipartimento di Biologia Animale, Università
di Pavia, Piazza Botta 9, I-27100, Pavia, Italy (Malacrida,
Central America, and Australia ( Fletcher species in the sub-Saharan East region
Marinoni, Torti, Gomulski, Sebastiani, Bonvicini, and 1989b). In these regions it exists in a wide ( Kenya) and to evidence the presence of
Gasperi), Dipartimento di Genetica e Microbiologia, variety of climates. History of infestation intraspecific differentiative processes of
Università di Pavia, Pavia, Italy (Guglielmino), and Is-
tituto di Genetica Biochimica ed Evoluzionistica del and geographical spread of this species ancestral versus peripheral populations.
CNR, Pavia, Italy (Guglielmino). We are very grateful to are well documented (for a comprehen- Very high levels of genetic variability have
Jeffrey R. Powell for critical reading of the manuscript sive review see Robinson and Hooper been detected in the African native popu-
and for his valuable suggestions. We appreciate the
help of two anonymous reviewers for their highly valu- 1989). The oldest derived populations are lations: this high level of genetic variabil-
able comments. We are indebted to the following peo- found in the Mediterranean area. More re- ity may reflect the genetic plasticity of this
ple for having provided the wild-collected specimens
of medfly: T. Mukiama ( University of Nairobi, Kenya);
cent colonization events characterize the polyphagous species which, in a very
E. Osir ( ICPE, Nairobi, Kenya); S. Quilici ( IFRA, Saint- New World populations. The question of short time, has reached a nearly cosmo-
Pierre, La Réunion); A. Mazih ( Institute de Agrono- why this species has become a major pest politan geographical distribution (Malacri-
mique et Vétérinaire-Hassan II, Agadir, Morocco); P.
Ross (CIT-INIA, Madrid, Spain); A. Barbosa (Madeira); has been approached by studies on zoo- da et al. 1996). With respect to the colo-
A. Economopoulos ( IMBB, Heraklion, Greece); F. De geography (Maddison and Bartlett 1989), nization pattern, we suggested that medfly
Lima ( Department of Agriculture, Perth, Western Aus- on population biology (Papadopoulos et populations, like those of Drosophila mel-
tralia); B. Katsoyannos ( University of Thessaloniki,
Thessaloniki, Greece); D. O. McInnis ( USDA-ARS, Ho- al. 1996), and on the analysis of the life- anogaster ( David and Capy 1988), can be
nolulu, Hawaii); P. Rendon ( USDA-APHIS, San Miguel, history strategies that this species has divided into three main categories: ances-
Petapa, Guatemala); Y. Roessler (Citrus Marketing
Board, Israel); L. Suess ( University of Milan, Milan, It-
evolved ( Fletcher 1989a). tral, ancient, and new populations from
aly); G. Zervas ( NCSR, Democritos, Athens, Greece). A description of medfly population sub-Saharan Africa, the Mediterranean ba-
This research was supported by grants from the Eu- structure is important both for a better sin, and the New World, respectively (Ma-
ropean Communities Commission ( ECC) (Project FAIR
PL96-1972), the National Ministry of the University and understanding of the history and future lacrida et al. 1992). Because historical pro-
Scientific Research and Technology (M.U.R.S.T. ‘‘Funds evolutionary potential of this pest species cesses seem to be important determinants
40%’’), and the International Atomic Energy Agency ( Vi- and its populations as well as for risk as- of medfly geographic variation, we have
enna, Austria). Address correspondence to Dr. Mala-
crida at the address above or e-mail: mala- sessment. The genetic aspects of the col- undertaken more extensive medfly sam-
[email protected]. onization process have been studied pling from throughout the species range
q 1998 The American Genetic Association 89:501–507 through the analysis of protein (Gasperi et to study the genetic consequences of the
501
worldwide colonization process. In this ar- two samples from Fodele collected in neutral mutation and that the genetic vari-
ticle we examine the results obtained with 1995. The Chios Island population consist- ability is at equilibrium between mutation
a multilocus enzyme electrophoresis ap- ed of three samples collected from August and genetic drift. Nei’s genetic distance is
proach on the distribution of genetic vari- 1992 to September 1993. The Greek flies expected, for a sample of many loci, to
ability in ancestral and derived popula- derive from two samples: one from Salon- rise linearly with time. The trees were con-
tions from the Mediterranean basin, Aus- icco and the other from Attica, collected structed using the unweighted pair-group
tralia, Latin America, and Pacific areas. in March and July 1994, respectively. arithmetic average ( UPGMA; Sneath and
The results are used to infer (1) a histori- Latin American region. This region is Sokal 1973) and neighbor-joining methods
cal interpretation of the population genet- represented by the population from Gua- with the PHYLIP 3.5c package ( Felsenstein
ic changes found in different geographic temala. The Guatemalan flies derive from 1993). The bootstrap method ( Efron 1982)
populations and (2) to assess the exis- three samples collected near Antigua, was applied to test the robustness of tree
tence of population substructuring in the from coffee berries, from December 1989 topology.
species range. to March 1994. F statistics were calculated in the med-
Pacific region. The Hawaiian flies derive fly sampling area, grouping the 17 above
from two samples collected in Mauna Loa mentioned populations into nine geo-
Materials and Methods
and Kauai in April 1992. graphical groups. Groups and populations
Populations of C. capitata Australian region. The Australian flies constitute the basis of a hierarchical de-
Eighty-two samples of 17 populations of C. derive from nine samples collected near sign for studying the degree of the genetic
capitata were collected from five regions Perth, from different hosts, from 1992 to isolation within and between groups. The
throughout the species range: Africa, ex- 1994. standardized genetic variance (FST; Wright
tra-Mediterranean islands, Mediterranean 1965) within and between each of the geo-
basin, New World, and Australia. Electrophoretic Studies graphical groups was estimated. For each
African region. In this region the follow- Preparation of samples and electrophoret- FST value obtained for each locus, we test-
ing three populations were sampled: Ken- ic procedures are described in Gasperi et ed the significance of deviation from zero
ya, Réunion, and Morocco. The Kenyan al. (1991). For each population sample at with the heterogeneity chi-square test
population was represented by 12 samples least 25 individuals were assayed at the (Workman and Niswander 1970), x2 5
of pupae, collected on coffee berries, over following 26 enzyme loci: Mpi, Mdh-1, Mdh- 2NFST(k 2 1) with (k 2 1)(s) degrees of
10 years (August 1984–August 1994) from 2, Hk-1, Hk-2, Est-1, Est-2, Pgi, Zw, Pgd, Fh, freedom, where N is the total sample size,
two farms near Nairobi. The population on Had, Idh, Pgm, Got-1, Got-2, Ak-1, Ak-2, Adh- k is the number of alleles for the locus,
Réunion was sampled 14 times (October 2, Gpt, Pgk, Me, a-Gpdh, Aox, Acon- 1, Acon- and s is the number of subpopulations.
1987–December 1994): 10 times near St. 2. Staining for enzyme activities, after elec- The total sample size (N) for each couple
Denis and 4 times in other places on the trophoresis, was based on the recipes of of groups is calculated on the basis of the
island. Pupae were collected from several Meera Khan (1971) and Harris and Hopkin- average sample size per population.
different host fruits. The Moroccan popu- son (1976). For each population we cal- To estimate the relationships between
lation was sampled nine times ( February culated the genotypic absolute frequen- FST values and geographical distances, log
1992–May 1993) from the Argania spinosa cies and the weighted mean allele frequen- geographic distances were calculated be-
forest on the western coast of that coun- cy of each locus across the relative sam- tween all pairs of groups and were re-
try (Mazih and Debouzie 1996). ples. gressed against FST values. To test the sig-
Extra-Mediterranean islands.One sample nificance of the relationships, we used the
was collected in Gran Canaria (October Data Analysis Mantel test (Mantel 1967) with 10,000 ran-
1994) from Prunus persica and one in Ma- Every population was tested for confor- dom permutations to correct for lack of
deira (October 1995) from Pirus communis. mance to the Hardy–Weinberg equilibrium independency between data points (GE-
Mediterranean region. The following nine at each polymorphic locus using the exact NEPOP, version 3, described by Raymond
populations were sampled: Spain, Sardin- probability test provided by the BIOSYS-1 and Rousset 1995).
ia, Procida Island, north Italy, Libya, Israel, program (Swofford and Selander 1981). As Gene flow estimates (Nm) were derived
Crete, Chios Island, and Greece. The Span- recommended by Rice (1989), the sequen- from the private allele method of Slatkin
ish population was sampled twice, near tial Bonferroni test was used on all the 156 (1985) and calculated between the nine
Valencia (September 1994) and near Tar- tests to determine if any cases showed sig- geographical groups. The mean frequency
ragona (October 1994). The population nificant departure from Hardy–Weinberg of private alleles [p(1)], indicates the av-
from Sardinia was sampled six times (Oc- expectations, with a 5 0.05. The single erage level of gene flow among subpopu-
tober 1985–October 1990) in the western populations were tested for the degree of lations according to the formula
and eastern parts of central Sardinia. The genetic variability. The average number of e {2[ln[p(1)]12.44]/0.505}
Procida Island population was sampled alleles per locus (A), percentage of poly- Nm 5 ,
N/25
seven times (June– August 1985). Three morphic loci (P), and mean heterozygosity
north Italy samples were collected around (H) were estimated for each population. where N is the average number of individ-
Milan: in October 1990, September 1992, We also estimated the expected number of uals sampled per population.
and November 1995. The Libyan popula- alleles per locus: ne 5 1/(1 2 H).
tion was sampled once in August 1992. The relationships between the popula- Results
The Israel population was sampled twice tions were represented through a dendro- Estimates of Genetic Variability in the
near Tel Aviv in May 1991 and July 1993. gram obtained from Nei’s (1978) unbiased 17 Geographic Populations
The Crete population consisted of one genetic distances. In Nei’s method it is as- We scored a total of 124 alleles for the 26
sample from Sisses, collected in 1993, and sumed that all loci have the same rate of polymorphic loci which can be considered
Groups 1 2 3 4 5 6 7 8 9
1 South East Africa 0.261 0.014 0.023 0.070 0.063 0.021 0.066 0.067
( Kenya) — 5917.8 500.1 1861.1 7619.8 1986.6 812.5 1411.5 3305.9
(168)* (146)* (178)* (150)* (152)* (148)* (146)* (150)*
2 Réunion 0.182 0.341 0.429 0.431 0.248 0.182 0.442
— 3033.2 7418.1 7215.7 9845.0 2341.9 3220.3 6809.2
(84)* (138)* (88)* (90)* (78)* (86)* (82)*
3 Extra-Mediterranean islands 0.026 0.006 0.102 0.242 0.007
(Canary, Madeira) 36.6 135.4 20.008 20.014 349.0 889.9 189.7
(24) (104) — — (34)* (34)* (32)*
4 Iberian–African group 0.023 0.017 0.028 0.133 0.032
(Morocco, Spain) 20.004 564.32 486.0 394.0 1847.2 586.3
— (112)* (110)* (108)* (108)* (106)*
5 West Mediterranean group 0.009 0.056 0.209 0.006
(Sardinia, Procida, North Italy) 71.3 20.010 518.1 2067.5 108.4
(57) — (40)* (46)* (42)*
6 East Mediterranean group 0.119 0.055 0.303
( Libya, Israel, Crete, Chios, Greece) 184.4 334.4 1525.5 20.023
(90)* (40)* (44)* —
7 Guatemala 0.302 0.095
821.5 479.1
— (26)* (26)*
8 Hawaii 0.316
1886.3
— (28)*
9 Australia —
a
Only if the group is composed of at least two populations. For groups 3 and 4, composed of only two populations, single samples of each population are at the low level of
the hierarchy.
b
When each of the compared groups is composed of only one population, single samples are considered at the low level of the hierarchy.
Chi-square estimates have not been computed for negative FST values, which result from negative variance components in the hierarchical analysis.
The degrees of freedom are in parentheses. The asterisk indicates tablewide Bonferroni statistical significance at a 5 0.05 (Rice 1989).
with the ancestral Kenyan population. Ré- terranean islands (H 5 0.081), 70% within of isolation by distance. The second re-
union has a high number of private alleles, the Mediterranean area (H 5 0.041), and gional level involves the recent expansion
some of which are fixed ( Baruffi et al. 77% in Australia (H 5 0.032). A loss of vari- into Latin America and the Pacific, where
1995), while Hawaii contains few private ability of 61% is observed within the pop- some ancestral variability is still present
alleles, but at very high frequencies. ulations from Hawaii and Guatemala (H 5 in the derived populations, since probably
0.053). there has not been sufficient time for the
We observe that the loss of variability two populations to reach a proper equilib-
Discussion
in the derived populations occurs at two rium variability.
Genetic Consequences of the regional levels. The first is at the African– The phylogenetic tree portrays well all
Colonization Process Mediterranean level: the decrease is grad- the above described aspects of the medfly
The analysis of variability parameters, ual from Kenya to Greece and it is tightly colonization process. In addition it reflects
such as H, P, ne, and A, clearly reveals the correlated with the timing of the medfly the presence of a great amount of differ-
dynamic aspects of the population genetic expansion. In this range the genetic differ- entiation affecting the two island popula-
changes associated with the worldwide entiation is also positively related with the tions, Réunion and Hawaii. The old popu-
spread of the medfly. The East African geographic distance, with a clear pattern lation from Réunion and the new one from
area, represented here by the Kenyan pop- Hawaii may represent two examples of in-
ulation, is confirmed as the ancestral cipient geographic differentiation due to
source area of the species ( Baruffi et al. island isolation. All the other derived pop-
1995; Gasperi et al. 1991). This native pop- ulations still maintain genetic affinity with
ulation is characterized by a high number the ancestral Kenyan population; among
of alleles per locus, most of which are at them, the Guatemalan population is the
low frequency and found only in this pop- closest. The Mediterranean populations
ulation: we consider these alleles as ‘‘an- form a compact cluster with a very short
cestral’’ ones. The geographical dispersal range of genetic distances. However, incip-
of medfly from the source area is associ- ient genetic substructuring within this
ated with a gradual and great reduction of area is supported by the hierarchical anal-
variability, which is indicative of a coloni- ysis data showing the eastern Mediterra-
zation process probably through subse- nean group as the most heterogeneous.
Figure 3. Plot of FST against log geographic distance
quent bottlenecks. The loss in variability for all pairs of nine population groups. White circles Agreement of the Genetic Data With
is quantifiable: from the ancestral level of indicate comparisons including New World and Austra- the Proposed Worldwide Colonization
H 5 0.137 in Kenya, 34% is lost within the lian populations; black circles indicate comparisons Pattern
not including New World and Australian populations.
African area (H 5 0.090 in Morocco and The regression line is shown only for the latter com- From its supposed origin in southern East
0.091 in Réunion), 41% in the extra-Medi- parisons (FST 5 21.198 1 0.364 log distance; r2 5 0.38). Africa ( Hagen et al. 1981), the medfly