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In [1]: import numpy as np
import pandas as pd
import matplotlib.pyplot as plt
import seaborn as sns
In [10]: from sklearn.datasets import load_iris
from sklearn.neighbors import KNeighborsClassifier
from sklearn.metrics import confusion_matrix, accuracy_score
from sklearn.model_selection import cross_val_score
from sklearn.model_selection import train_test_split
from sklearn.metrics import classification_report
from sklearn metrics import f1_score
In [11]: iris_data=load_iris()
iris_data keys()
Out[11]: dict_keys(['data', 'target', 'frame', 'target_names', 'DESCR', 'feature_names
', 'filename', 'data_module'])
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In [14]: print(iris_data['DESCR'])
.. _iris_dataset:
Iris plants dataset
--------------------
**Data Set Characteristics:**
:Number of Instances: 150 (50 in each of three classes)
:Number of Attributes: 4 numeric, predictive attributes and the class
:Attribute Information:
- sepal length in cm
- sepal width in cm
- petal length in cm
- petal width in cm
- class:
- Iris-Setosa
- Iris-Versicolour
- Iris-Virginica
:Summary Statistics:
============== ==== ==== ======= ===== ====================
Min Max Mean SD Class Correlation
============== ==== ==== ======= ===== ====================
sepal length: 4.3 7.9 5.84 0.83 0.7826
sepal width: 2.0 4.4 3.05 0.43 -0.4194
petal length: 1.0 6.9 3.76 1.76 0.9490 (high!)
petal width: 0.1 2.5 1.20 0.76 0.9565 (high!)
============== ==== ==== ======= ===== ====================
:Missing Attribute Values: None
:Class Distribution: 33.3% for each of 3 classes.
:Creator: R.A. Fisher
:Donor: Michael Marshall (MARSHALL%
[email protected])
:Date: July, 1988
The famous Iris database, first used by Sir R.A. Fisher. The dataset is taken
from Fisher's paper. Note that it's the same as in R, but not as in the UCI
Machine Learning Repository, which has two wrong data points.
This is perhaps the best known database to be found in the
pattern recognition literature. Fisher's paper is a classic in the field and
is referenced frequently to this day. (See Duda & Hart, for example.) The
data set contains 3 classes of 50 instances each, where each class refers to
a
type of iris plant. One class is linearly separable from the other 2; the
latter are NOT linearly separable from each other.
.. topic:: References
- Fisher, R.A. "The use of multiple measurements in taxonomic problems"
Annual Eugenics, 7, Part II, 179-188 (1936); also in "Contributions to
Mathematical Statistics" (John Wiley, NY, 1950).
- Duda, R.O., & Hart, P.E. (1973) Pattern Classification and Scene Analysi
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s.
(Q327.D83) John Wiley & Sons. ISBN 0-471-22361-1. See page 218.
- Dasarathy, B.V. (1980) "Nosing Around the Neighborhood: A New System
Structure and Classification Rule for Recognition in Partially Exposed
Environments". IEEE Transactions on Pattern Analysis and Machine
Intelligence, Vol. PAMI-2, No. 1, 67-71.
- Gates, G.W. (1972) "The Reduced Nearest Neighbor Rule". IEEE Transactio
ns
on Information Theory, May 1972, 431-433.
- See also: 1988 MLC Proceedings, 54-64. Cheeseman et al"s AUTOCLASS II
conceptual clustering system finds 3 classes in the data.
- Many, many more ...
In [15]: df=pd.DataFrame(iris_data.data,columns=iris_data.feature_names)
df info()
<class 'pandas.core.frame.DataFrame'>
RangeIndex: 150 entries, 0 to 149
Data columns (total 4 columns):
# Column Non-Null Count Dtype
--- ------ -------------- -----
0 sepal length (cm) 150 non-null float64
1 sepal width (cm) 150 non-null float64
2 petal length (cm) 150 non-null float64
3 petal width (cm) 150 non-null float64
dtypes: float64(4)
memory usage: 4.8 KB
In [16]: df head()
Out[16]:
sepal length (cm) sepal width (cm) petal length (cm) petal width (cm)
0 5.1 3.5 1.4 0.2
1 4.9 3.0 1.4 0.2
2 4.7 3.2 1.3 0.2
3 4.6 3.1 1.5 0.2
4 5.0 3.6 1.4 0.2
In [17]: df['target'] = iris_data.target
df head()
Out[17]:
sepal length (cm) sepal width (cm) petal length (cm) petal width (cm) target
0 5.1 3.5 1.4 0.2 0
1 4.9 3.0 1.4 0.2 0
2 4.7 3.2 1.3 0.2 0
3 4.6 3.1 1.5 0.2 0
4 5.0 3.6 1.4 0.2 0
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In [18]: df[df target 1].head()
Out[18]:
sepal length (cm) sepal width (cm) petal length (cm) petal width (cm) target
50 7.0 3.2 4.7 1.4 1
51 6.4 3.2 4.5 1.5 1
52 6.9 3.1 4.9 1.5 1
53 5.5 2.3 4.0 1.3 1
54 6.5 2.8 4.6 1.5 1
In [19]: df[df target 2].head()
Out[19]:
sepal length (cm) sepal width (cm) petal length (cm) petal width (cm) target
100 6.3 3.3 6.0 2.5 2
101 5.8 2.7 5.1 1.9 2
102 7.1 3.0 5.9 2.1 2
103 6.3 2.9 5.6 1.8 2
104 6.5 3.0 5.8 2.2 2
In [20]: iris_data['target_names']
Out[20]: array(['setosa', 'versicolor', 'virginica'], dtype='<U10')
In [21]: df['flower_name'] = df.target.apply(lambda x:iris_data.target_names[x])
df head()
Out[21]:
sepal length (cm) sepal width (cm) petal length (cm) petal width (cm) target flower_name
0 5.1 3.5 1.4 0.2 0 setosa
1 4.9 3.0 1.4 0.2 0 setosa
2 4.7 3.2 1.3 0.2 0 setosa
3 4.6 3.1 1.5 0.2 0 setosa
4 5.0 3.6 1.4 0.2 0 setosa
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In [22]: df[45:55]
Out[22]:
sepal length (cm) sepal width (cm) petal length (cm) petal width (cm) target flower_name
45 4.8 3.0 1.4 0.3 0 setosa
46 5.1 3.8 1.6 0.2 0 setosa
47 4.6 3.2 1.4 0.2 0 setosa
48 5.3 3.7 1.5 0.2 0 setosa
49 5.0 3.3 1.4 0.2 0 setosa
50 7.0 3.2 4.7 1.4 1 versicolor
51 6.4 3.2 4.5 1.5 1 versicolor
52 6.9 3.1 4.9 1.5 1 versicolor
53 5.5 2.3 4.0 1.3 1 versicolor
54 6.5 2.8 4.6 1.5 1 versicolor
In [25]: df0 = df[:50]
df1 = df[50:100]
df2 df[100:]
In [28]: plt.xlabel('Sepal Length')
plt.ylabel('Sepal Width')
plt.scatter(df0['sepal length (cm)'], df0['sepal width (cm)'],color="green",marker
plt scatter(df1['sepal length (cm)'], df1['sepal width (cm)'],color "blue" marker
Out[28]: <matplotlib.collections.PathCollection at 0x1da65e0bfa0>
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In [29]: plt.xlabel('Petal Length')
plt.ylabel('Petal Width')
plt.scatter(df0['petal length (cm)'], df0['petal width (cm)'],color="green",marker
plt scatter(df1['petal length (cm)'], df1['petal width (cm)'],color "blue" marker
Out[29]: <matplotlib.collections.PathCollection at 0x1da65e7bb50>
In [30]: df head()
Out[30]:
sepal length (cm) sepal width (cm) petal length (cm) petal width (cm) target flower_name
0 5.1 3.5 1.4 0.2 0 setosa
1 4.9 3.0 1.4 0.2 0 setosa
2 4.7 3.2 1.3 0.2 0 setosa
3 4.6 3.1 1.5 0.2 0 setosa
4 5.0 3.6 1.4 0.2 0 setosa
In [33]: X = df.drop(['target','flower_name'],axis='columns')
y df target
In [34]: X_train X_test y_train y_test train_test_split(X y test_size 0.30 random_state
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In [35]: knn = KNeighborsClassifier(n_neighbors=3)
knn fit(X_train y_train)
Out[35]: ▾ KNeighborsClassifier
KNeighborsClassifier(n_neighbors=3)
In [38]: knn (X_test y_test)
Out[38]: 0.9777777777777777
In [39]: knn (X_train y_train)
Out[39]: 0.9523809523809523
In [41]: knn predict([[5.2 3.1 1.5 0.3]])
C:\Users\DELL\anaconda3\lib\site-packages\sklearn\base.py:420: UserWarning: X
does not have valid feature names, but KNeighborsClassifier was fitted with f
eature names
warnings.warn(
Out[41]: array([0])
In [42]: y_pred = knn.predict(X_test)
cm = confusion_matrix(y_test,y_pred)
Out[42]: array([[14, 0, 0],
[ 0, 18, 0],
[ 0, 1, 12]], dtype=int64)
In [44]: cm1 = pd.DataFrame(data=cm,index=[0,1,2],columns=['setosa','versicolor','virginica'
cm1
Out[44]:
setosa versicolor virginica
0 14 0 0
1 0 18 0
2 0 1 12
In [45]: print(classification_report(y_test y_pred))
precision recall f1-score support
0 1.00 1.00 1.00 14
1 0.95 1.00 0.97 18
2 1.00 0.92 0.96 13
accuracy 0.98 45
macro avg 0.98 0.97 0.98 45
weighted avg 0.98 0.98 0.98 45
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In [ ]:
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