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01 Introduction

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01 Introduction

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Lecture ‫الجامعـــة التقنيـــة الجنوبيــــة‬

3rd Stage
01 ‫كلية التقنيات الصحية والطبيـة‬
Medical Genetics
2021-2022 ‫قســـم التحليـــالت المرضيــــة‬

Medical Genetics
Introduction

Dr. Hussam S. Aziz


MSc. Medical Genetics
Medical Genetics

 Genetics: is the branch of biology that deals with the structures


of genetic material and the transmission of characters from
one generation to another

 Medical Genetics: is the branch of medical sciences that deals


with heritable (genetic) diseases in terms of transmission,
pathogenesis, diagnosis, treatment and prevention

2
Branches of Medical Genetics

 Cytogenetics

 Molecular genetics

 Biochemical genetics

 Epigenetics

 Clinical genetics

 Population genetics 3
Branches of Medical Genetics
 Cytogenetics: deals with chromosomal structure and
abnormalities at the chromosomal level

 Molecular Genetics: deals with nucleic acids structures and


abnormalities at the molecular level (one or few nucleotides)

 Biochemical Genetics: deals with the biochemical changes in


the body that are associated with genetic disorders

4
Branches of Medical Genetics
 Epigenetics: deals with the effects of external (environmental)
factors on genes expression

 Clinical Genetics: deals with clinical presentation and


transmission of genetic diseases in families

 Population Genetics: deals with the frequency of genetic


diseases and mutations at the population level

5
History

Development Of Genetics

6
Development of Genetics Across History
Dawn of civilization
… humankind has recognized the
influence of heredity and applied its
principles to the improvement of
cultivated crops and domestic
animals

7
Development of Genetics Across History
An old carvings show cross-
pollination of date palm trees

A Babylonian tablet more than 6,000 years


old shows pedigrees of horses

8
Early Theories

Hippocrates (father of medicine), 460- 375 BCE,


hypothesis of pangenesis

Aristotle, 384–322 BCE, emphasized


the importance of blood in heredity

Preformation theory
(until 18th century)
Theory of Epigenesis

9
Development of Genetics

Most of the mechanisms of heredity, however, remained


a mystery until the 19th century, when genetics as a
systematic science began 10
Development of Microscope
 14th century spectacles first made in Italy

 1590 Two Dutch spectacle-makers, a father-and-son team,


Hans and Zacharias Janssen, created the first compound
microscope

11
Development of Microscope
 1667 Robert Hooke's famous "Micrographia" is published,
which outlines Hooke's various studies using the microscope

12
13
Development of Microscope
 1675 Anton van Leeuwenhoek, used a microscope with one
lens to observe insects and other specimen

14
Development of Microscope

15
Electron Microscope
 1931 Max Knoll and Ernst Ruska invented the first electron
microscope

16
Cell Theory
 1665 the term Cell (cella=room) was first used by Robert
Hooke (British)
 1839 Cell theory was proposed, independently,
by Theodor Schwann, Matthias Jakob Schleiden
and Rudolf Virchow

 Cell Theory
 All living organisms are composed of one or more cells
 Cell is the basic unit of life
 New cells arise from existing cells
17
Gregor Johann Mendel (Father of Genetics) 1822-1884

18
Gregor Johann Mendel (1822-1884)
 20th Jul,1822 – 6th Jan, 1884
 Austrian monk and scientist
 Father of modern genetics
 Studied the segregation of traits in pea plant
 Experiments 1856 - 1863
 Mendel’s laws of inheritance

19
Gregor Johann Mendel (1822-1884)

20
Discoveries
 1835 botanist Hugo von Mohl, described cell division
 1878 Walter Flemming used the term mitosis
 1876 Oscar Hertwig described meiosis
 1905 the term meiosis was introduced by J.B. Farmer and J.E.
Moore
 1902 “Chromosomal theory of inheritance”
was proposed by Walter Sutton and
Theodor Boveri

21
The DNA Era
22
Discover DNA Structure
 1869 DNA Structure (nuclein) was identified
by Swiss chemist Johann Fredrich Miescher
 1881 Albrecht Kossel isolated the building
blocks (nucleotides) of nucleic acids:
 Adenine (A)
 Guanine (G)
 Cytosine (C)
 Thymine (T)
 Uracil (U)

23
DNA Structure
 1952 a picture of DNA was taken by Rosalind
Franklin using X-ray

 1953 James Watson & Francis Crick


described the double-helix structure of
DNA 24
Invention
 1928 First induced mutation by Lewis John
Stadler by using X-ray with corn

 1977 DNA sequencing was first developed


Frederick Sanger

 1983 PCR was developed by Kary Mullis

 2014 Next Generation Sequencer (NGS)


25
Discoveries
 1976 first complete genome sequenced of macrophage MS2

 1990-2003 Human Genome Project

 1996 sheep Dolly, the first cloned animal

26
27
Living Organisms

28
Types of Cells

29
30
Viruses

31
Some Facts

 Cell is the basic unit of life, 2 types of cells:


 Prokaryotic cells bacteria
 Eukaryotic cells unicellular organisms, multicellular
organisms like fungi, animals, plants, humans
 The genetic material present in the nucleus:
 Surrounded by nuclear membrane in eukaryotes
 Not separated from the cytoplasm in prokaryotes (nucleoid)
 Viruses are intermediate, either DNA or RNA
 Human body contains trillions (10^9) of cells
32
Nucleic Acid Structure

33
Nucleic Acids
 2 types of nucleic acids:
 Deoxyribonucleic acid (DNA)
 Ribonucleic acid (RNA)
 DNA stores the genetic information
 Arranged as chromosomes in the nucleus and mitochondria
 Every species has a unique number of chromosomes called
the diploid number (2n), e.g. mouse= 42, fruit fly=8
 Human cell contains 46 chromosomes (23 pairs of
chromosomes)
34
Medical Genetics

35
Medical Genetics

36
DeoxyriboNucleic Acids (DNA)

37
DNA Arrangement

38
Medical Genetics

39
Human Genome (Karyotype)

40
DNA Arrangement in Chromosomes

 Double helix
 2 parallel strands
 Continuous molecule
 Supercoiled
 Wrapped on Histone protein
 Nucleosomes

41
DNA Arrangements

42
DeoxyriboNucleic Acid (DNA)
 Stores the genetic information in the nucleus
 Polymer of nucleotides
 Arranged as continuous, double helix molecule
 Measuring unit is base pair (bp)
 Human genome consists of about 3 billion
(10^9) bp
 DNA also in presents in the mitochondria

43
DNA Sizes

44
Nucleotide
 Building block of nucleic acids
 Consists of:
 Nitrogenous base
 Pentose sugar
 Phosphate group
 5 types of nitrogenous bases
 Sugar is:
 Deoxyribose in DNA
 Ribose in RNA

45
Nitrogenous Bases
• Purines (2 rings)
– Adenine A (DNA & RNA)
– Guanine G (DNA & RNA)

• Pyrimidines (1 ring)
– Cytosine C (DNA & RNA)
– Thymine T (DNA only)
– Uracil U (RNA only

46
Pentose Sugar
 Pentose: 5 carbon atoms
 Carbon atoms are numbered 1' – 5' (' prime)
 Deoxyribose in DNA
 Ribose in RNA

47
Phosphate Groups
 1, 2, or 3 phosphate molecules can be added to free
nucleotides
 Nitrogenous Base + Sugar = Nucleoside
 Nitrogenous Base + Sugar + Phosphate = Nucleotide

48
Nomenclature

49
DNA Nucleotides

50
Nucleotides Arrangement in DNA
 Nucleic acids are polymers of
nucleotides

 In DNA and RNA, nucleotides are


linked together by their sugar and
phosphate groups to form
sugar--phosphate backbone

 Nitrogenous bases remain free


51
Nucleotides Arrangement in DNA
 Nucleotides are linked together by
Phosphodiester Bonds
 Every nucleotide is linked with:
 the previous nucleotide at its sugar
carbon atom number 5'
 the next nucleotide at its sugar
carbon atom number 3'

52
Nucleotides Arrangement in DNA

53
Nucleotides Arrangement in DNA
 This arrangements creates 2
ends to the nucleic acid:
 5' end
 3' end

 Nucleic acids sequence is read


in the 5' end  3' end
direction

54
Nucleotides Arrangement in DNA

55
Base Pairing in DNA
 DNA molecule consists of 2 strands

 Nitrogenous bases in one strand


pair with the bases in the other
strand by hydrogen bonds

 This pairing holds the two strands


together

56
Base Pairing in DNA
 Base pairing is complementary, that:

 Adenine pairs with Thymine by 2


hydrogen bonds (A=T)

 Cytosine pairs with Guanine by 3


hydrogen bonds (C≡G)

57
Base Pairing in DNA
 This arrangement makes the 2 strands of DNA:
 Complementary to each other

 Run in opposite directions (antiparallel)

 Gives DNA more stability

 Hydrogen bonds break by heating

58
Base Pairing in DNA

59
DNA Structure (Summary)

60
RiboNucleic Acids (RNA)

61
Ribonucleic Acid (RNA)
 Single stranded nucleic acid
 Involved in the process of protein synthesis
 3 main types:
 Messenger RNA (mRNA)
 Transfer RNA (tRNA)
 Ribosomal RNA (rRNA)
 Presents in the nucleus and cytoplasm
 Bases: Adenine, Cytosine, Guanine, Uracil
 Pentose sugar is: Ribose
 Other types of RNA: miRNA, snRNA, siRNA, etc. 62
Messenger RNA (mRNA)
 Single stranded
 Function: carries genetic information
from DNA in the nucleus to the
cytoplasm for protein synthesis
 Size: varies, depends on the gene that
was transcribed from (~500-5000 bases)
 Short lived, less stable than DNA, cells
degrade mRNA after its role finishes

63
Transfer RNA (tRNA)
 Folded into clover leaf shape

 Function: carries amino acids to the site


of protein synthesis in the ribosomes

 Size: ~70-90 base

64
Ribosomal RNA (rRNA)
 Combines with proteins to form
ribosomes, the site of protein
synthesis
 Size: variable

65
Types of RNA

66
Function of RNA

67
Function of RNA

68
Mitochondrial DNA (mtDNA)

69
Mitochondrial DNA (mtDNA)
 Mitochondria contain small, double
stranded, circular DNA molecules

 16,569 bp in length

 Each mitochondria has several


copies of the mtDNA

70
Mitochondrial DNA (mtDNA)
 Contains 37 genes responsible for the production of proteins
and enzymes required for the mitochondrial function
 mtDNA is inherited from the mother only

71
Prokaryotic Nucleic Acids

72
Prokaryotic DNA

73
Prokaryotic DNA
 Prokaryotes (bacteria) have both, DNA & RNA
 No nuclear membrane separates the DNA from the cytoplasm
 Bacterium has a single circular chromosome
 Additional smaller DNA molecules
 Plasmid: Circular DNA molecules
 Transposon: Linear DNA molecules
 Bacteria can exchange genetic information by plasmids and
transposons
 No histone protein in the DNA
74
Prokaryotic DNA

75
Viral Nucleic Acids

76
Sizes of Various Genetic Elements

77
78

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