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@OATML-Markslab

OATML-Markslab

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  1. ProteinGym ProteinGym Public

    Official repository for the ProteinGym benchmarks

    Python 389 51

  2. EVE EVE Public

    Forked from OATML/EVE

    Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Joint collaboration between the Marks lab and the OATML group.

    Python 192 40

  3. Tranception Tranception Public

    Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"

    Python 162 27

  4. ProteinNPT ProteinNPT Public

    Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"

    Python 127 18

  5. EVEscape EVEscape Public

    Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"

    Python 70 13

  6. Protriever Protriever Public

    Official repository for the Protriever paper

    16

Repositories

Showing 7 of 7 repositories
  • ProteinGym Public

    Official repository for the ProteinGym benchmarks

    OATML-Markslab/ProteinGym’s past year of commit activity
    Python 389 MIT 51 12 2 Updated Jan 12, 2026
  • ProteinNPT Public

    Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"

    OATML-Markslab/ProteinNPT’s past year of commit activity
    Python 127 MIT 18 6 0 Updated Nov 19, 2025
  • OATML-Markslab/proteingym_website’s past year of commit activity
    JavaScript 1 1 0 0 Updated Jun 14, 2025
  • Protriever Public

    Official repository for the Protriever paper

    OATML-Markslab/Protriever’s past year of commit activity
    16 0 2 0 Updated Jun 5, 2025
  • EVE Public Forked from OATML/EVE

    Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Joint collaboration between the Marks lab and the OATML group.

    OATML-Markslab/EVE’s past year of commit activity
    Python 192 MIT 62 0 3 Updated Mar 16, 2024
  • EVEscape Public

    Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"

    OATML-Markslab/EVEscape’s past year of commit activity
    Python 70 MIT 13 3 1 Updated Oct 11, 2023
  • Tranception Public

    Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"

    OATML-Markslab/Tranception’s past year of commit activity
    Python 162 MIT 27 5 1 Updated Aug 24, 2023

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