Stars
Code for magnetic susceptibility source separation
The Impact of Fiber Orientation Features on Direct White Matter Tract Segmentation
A Visual Introduction to Hierarchical Modeling
MATLAB-based code for reconstructing quantitative susceptibility and relaxation maps
GLSL surface rendering source code. Compiled versions available from NITRC. Loads 3DS, CTM, DXF, FreeSurfer, GII (GIfTI), GTS, LWO2, MS3D, MZ3, NV (BrainNetViewer), OBJ, OFF, PLY, STL, VTK. Tractog…
PETPrep head motion correction workflow
U fiber analysis: a toolbox for automated quantification of U-fibers and white matter hyperintensities
An optimized deep learning-based method for dentate nucleus labeling.
A state-of-the-art semi-supervised method for image recognition
Codes and data for the paper “Convergent and divergent functional topographies of individualized human brain network and their developmental origins.” This repository includes preprocessing scripts…
Personalized functional topography in neonatal brain networks
DTI-ALPS: diffusion tensor imaging along the perivascular space
Subtype and Stage Inference (SuStaIn) algorithm with an example using simulated data.
Subtype and Stage Inference [Young+, Nature Communications 2018]
Convert tractography studies from mrtrix into dicom for use in navigation software
A MATLAB toolbox for exporting publication quality figures
🐉 Compute and work with indices of effect size and standardized parameters
A MATLAB package for multivariate permutation testing and effect size measurement
Example download scripts for the OASIS3 project