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@MesserLab

Messer Lab

The lab of Philipp Messer at Cornell University

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  1. SLiM SLiM Public

    SLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexible, with a built-in scripting language, and has a cross-platf…

    C++ 210 36

  2. SLiM-Extras SLiM-Extras Public

    Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself

    Jupyter Notebook 44 17

  3. asymptoticMK asymptoticMK Public

    A web-based tool for estimating alpha, the fraction of nucleotide substitutions in a given genomic region that were driven to fixation by positive selection.

    R 6 1

  4. ResourceExplicitModels ResourceExplicitModels Public

    Models and data for "Resource-Explicit Interaction Models for Spatial Populations"

    Slim 6

  5. GeneDriveForSuppressionOfInvasiveRodents GeneDriveForSuppressionOfInvasiveRodents Public

    Files and data to accompany "Modeling CRISPR gene drives for suppression of invasive rodents".

    Python 3 1

  6. evolve-resequence-simulation evolve-resequence-simulation Public

    A customizable tool for simulation of evolve and resequence experiments on a quantitative trait

    R 2 3

Repositories

Showing 10 of 26 repositories
  • SLiM Public

    SLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexible, with a built-in scripting language, and has a cross-platform graphical modeling environment called SLiMgui.

    MesserLab/SLiM’s past year of commit activity
    C++ 210 GPL-3.0 36 33 (5 issues need help) 4 Updated Feb 12, 2026
  • SLiM5Paper Public

    Scripts and data for our paper about SLiM 5.0.

    MesserLab/SLiM5Paper’s past year of commit activity
    Slim 0 MIT 0 0 0 Updated Jan 22, 2026
  • Containment Public

    Code and data for "Predicting the invasiveness of threshold-dependent gene drives" paper

    MesserLab/Containment’s past year of commit activity
    R 0 0 0 0 Updated Nov 9, 2025
  • multilocus-suppression Public
    MesserLab/multilocus-suppression’s past year of commit activity
    R 0 0 0 0 Updated Nov 8, 2025
  • SLiM-Extras Public

    Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself

    MesserLab/SLiM-Extras’s past year of commit activity
    Jupyter Notebook 44 17 0 1 Updated Oct 30, 2025
  • MultispeciesGeneDriveNZ Public

    Code for the forthcoming "Evaluating Gene Drive for Invasive Mammal Control in a Complex Ecological Model of the South Island of New Zealand".

    MesserLab/MultispeciesGeneDriveNZ’s past year of commit activity
    Slim 0 0 0 0 Updated Oct 26, 2025
  • SLiM-Tests Public

    Additional tests for SLiM validation and performance evaluation

    MesserLab/SLiM-Tests’s past year of commit activity
    Slim 0 1 0 0 Updated Apr 20, 2025
  • ResourceExplicitModels Public

    Models and data for "Resource-Explicit Interaction Models for Spatial Populations"

    MesserLab/ResourceExplicitModels’s past year of commit activity
    Slim 6 0 0 0 Updated Apr 14, 2025
  • cluster-guide Public
    MesserLab/cluster-guide’s past year of commit activity
    Slim 1 0 0 0 Updated Dec 5, 2023
  • SLiM-Benchmarks Public

    Benchmarking scripts to compare single-threaded and multi-threaded SLiM performance

    MesserLab/SLiM-Benchmarks’s past year of commit activity
    Slim 1 1 0 0 Updated Aug 14, 2023
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