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⚔️Python Rate-Limiter using Leaky-Bucket Algorithm Family

Python 476 45 Updated Feb 4, 2026

A script that gets specified number of merged PRs from Github GraphQl and anonymizes sensitive data

Python 3 Updated Dec 23, 2025

Repository of the Website about Dynamic Consistency Boundaries

PHP 27 14 Updated Feb 10, 2026

A python library for metabolic networks sampling and analysis

Python 63 59 Updated Feb 4, 2026

Kedro is a toolbox for production-ready data science. It uses software engineering best practices to help you create data engineering and data science pipelines that are reproducible, maintainable,…

Python 10,759 993 Updated Feb 14, 2026

original documents on topics related to software project management

TeX 17 1 Updated May 25, 2022

Download FASTQ files from SRA or ENA repositories.

Python 367 27 Updated Feb 1, 2026

A grammar of graphics for comparative genomics

R 741 68 Updated Feb 13, 2026

🎨 colormaps cooked for your palate

Python 31 2 Updated Oct 19, 2024

MGnify genome analysis pipeline

Python 108 22 Updated Jan 9, 2026

Learn how to design large-scale systems. Prep for the system design interview. Includes Anki flashcards.

Python 335,419 54,427 Updated Nov 3, 2025

Sparnatural : visual knowledge graph explorer with SPARQL, in the browser, configurable with SHACL

TypeScript 280 49 Updated Feb 13, 2026

Structurizr DSL

Java 1,419 257 Updated Jan 10, 2024

Simple test framework for Nextflow pipelines

Java 176 37 Updated Feb 13, 2026

A pipeline to simulate sequencing reads, such as Amplicon, Target Capture, Metagenome, and Whole genome data.

Nextflow 33 8 Updated Jun 3, 2025

A very fast Python docstring linter

Python 204 21 Updated Nov 26, 2025

The official repository for the AiiDA code

Python 540 249 Updated Feb 13, 2026

A simple & elegant experiment tracking framework that integrates persistence logic & best practices directly into Python

Jupyter Notebook 538 16 Updated Jan 14, 2025

Assembly and annotation of metatranscriptomic or metagenomic data for prokaryotic, eukaryotic and viruses.

Nextflow 33 17 Updated Nov 20, 2025

Orchestrating Microbiome Analysis

TeX 106 53 Updated Feb 11, 2026

microbiome data simulation package

R 22 8 Updated Oct 2, 2025

Microbiome analysis

R 54 34 Updated Feb 9, 2026

This repository hosts a large collection of Nextflow snippets

56 1 Updated Jan 26, 2025

Nextflow runs monitoring and organisation UI

TypeScript 77 13 Updated Sep 20, 2024

data load tool (dlt) is an open source Python library that makes data loading easy 🛠️

Python 4,908 449 Updated Feb 14, 2026

Meson PEP 517 Python build backend

Python 174 83 Updated Jan 26, 2026

This is the Rust course used by the Android team at Google. It provides you the material to quickly teach Rust.

Rust 32,640 1,969 Updated Feb 14, 2026

Fast and space-efficient taxonomic classification of long reads

C++ 43 2 Updated Aug 25, 2025

A Python DSL inspired by Structurizr, intended for generating C4 diagrams

Python 140 22 Updated Mar 6, 2024

an ambient intelligence library

Python 6,081 394 Updated Feb 13, 2026
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