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@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.
README.md

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain. (thanks to Tony Boyles)

If you would like to create a new project, please complete this form logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

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  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 23 32

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    40 49

Repositories

Showing 10 of 511 repositories
  • cdc-open-viz Public

    CDC OpenViz is a library of React packages for data visualization.

    CDCgov/cdc-open-viz’s past year of commit activity
    TypeScript 46 Apache-2.0 30 0 4 Updated Dec 22, 2025
  • ixa-epi-isolation Public
    CDCgov/ixa-epi-isolation’s past year of commit activity
    Rust 1 Apache-2.0 2 33 4 Updated Dec 22, 2025
  • nccdphp-drh-mmria Public
    CDCgov/nccdphp-drh-mmria’s past year of commit activity
    C# 2 GPL-3.0 0 0 1 Updated Dec 22, 2025
  • dibbs-ecr-refiner Public

    The DIBBs eCR Refiner reduces eICR and RR files down to only the most useful, necessary information to alleviate performance and storage burden on eCR data pipelines and disease surveillance systems and bring focus to pertinent data for a given reportable condition.

    CDCgov/dibbs-ecr-refiner’s past year of commit activity
    XSLT 4 Apache-2.0 3 58 11 Updated Dec 22, 2025
  • pyrenew-hew Public

    Models and infrastructure for forecasting respiratory disease hospitalizations using wastewater data with PyRenew.

    CDCgov/pyrenew-hew’s past year of commit activity
    Python 16 Apache-2.0 3 61 5 Updated Dec 22, 2025
  • PyRenew Public

    Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.

    CDCgov/PyRenew’s past year of commit activity
    Python 23 Apache-2.0 9 52 4 Updated Dec 21, 2025
  • cran-packages Public

    Searches CRAN for packages that might have been authored or funded by CDC

    CDCgov/cran-packages’s past year of commit activity
    R 2 1 0 0 Updated Dec 21, 2025
  • Opioid_SUD_MHI_MedCodes Public

    Code to flag ICD-10-CM codes related to opioid involvement, substance use disorder, and mental health issues in structured hospital data

    CDCgov/Opioid_SUD_MHI_MedCodes’s past year of commit activity
    Python 7 8 0 0 Updated Dec 22, 2025
  • phylophoenix Public

    🔥🌿🐦🔥PhyloPHoeNIx: Pipeline for relatedness determination using PHoeNIx output.

    CDCgov/phylophoenix’s past year of commit activity
    Python 9 Apache-2.0 0 4 1 Updated Dec 21, 2025
  • phoenix Public

    🔥🐦🔥PHoeNIx: a platform agnostic pipeline for healthcare-associated and antimicrobial resistant pathogens

    CDCgov/phoenix’s past year of commit activity
    Python 88 Apache-2.0 35 12 0 Updated Dec 22, 2025
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