Online material for various workshops

Species of maritime fauna all over the world are known to travel great distances in the oceans and seas. The goal of this workflow is to be able to detect them by calculating sea distances (going a…

Generalized Additive Models; a data-driven approach to estimating regression models

CAPTAIN is a Python program to optimize conservation planning based on biodiversity data and simulations using reinforcement learning

This repo contains code for running species distribution models for marine species build under the commission of the Swedish Agency for Marine and Water Management (SWaM)” Provtagningsdesign med om…

Extract MGnify study to DwC archive

Species of maritime fauna all over the world are known to travel great distances in the oceans and seas. The goal of this workflow is to be able to detect them by calculating sea distances (going a…

Amplicon sequencing analysis workflow using DADA2 and QIIME2

This tool retrieves names of accepted, extant marine species from WORMS using a provided PID.

R package for community ecologists: popular ordination methods, ecological null models & diversity analysis

Versatile open-source tool for microbiome analysis

A curated list of awesome Bioinformatics libraries and software.