Portfolio website for Joseph Horder - Bioinformatician and Computational Biologist

├── docs/
│   ├── index.html          # Main HTML structure
│   ├── styles.css          # Styling and responsive design
│   ├── script.js           # JavaScript for content loading and interactivity
│   ├── about.md            # About section content
│   ├── projects.md         # Projects showcase
│   ├── publications.md     # Publications and presentations
│   ├── cv.md               # Curriculum vitae
│   └── blog.md             # Project blog posts
└── README.md               # This file

All content is managed through markdown files in the docs/ directory. Simply edit the .md files to update your portfolio.

Edit docs/about.md using markdown formatting. Write about your background, research interests, and expertise.

Edit docs/projects.md following this format:

## Project Title
**Tags:** Python, NGS, Machine Learning
**GitHub:** https://github.com/yourusername/project

Project description here explaining the problem, your approach, and results.

---

Edit docs/publications.md following this format:

## Publication Title
**Authors:** Author1, **Your Name**, Author3
**Journal:** *Journal Name*, Year
**DOI:** [10.xxxx/xxxxx](https://doi.org/10.xxxx/xxxxx)

Brief description of the work and your contribution.

---

Edit docs/cv.md with your full curriculum vitae including education, experience, skills, awards, and service.

Edit docs/blog.md to add project blog posts:

## Post Title: Description
**Date:** Month Year

Your blog post content with sections, code blocks, and images.

**Tags:** Tag1, Tag2, Tag3

---

Edit the contact links directly in docs/index.html (lines ~167-183) to update your email, GitHub, LinkedIn, and Google Scholar links.

Edit the skills section directly in docs/index.html (lines ~67-102) to customize your technical skills.

Use a local server (recommended for proper markdown loading):

cd docs
python -m http.server 8000
# Then visit http://localhost:8000

1. Commit your changes:

git add .
git commit -m "Update portfolio content"
git**Configure GitHub Pages to use the `/docs` folder:**
   - Go to your repository settings on GitHub
   - Navigate to "Pages" section
   - Under "Source", select "Deploy from a branch"
   - Choose "main" branch and "/docs" folder
   - Save

2. Commit your changes:
```bash
git add .
git commit -m "Update portfolio content"
git push origin main

• 📝 Content managed via markdown files
• 🎨 Modern, responsive design
• 📱 Mobile-friendly with hamburger menu
• ⚡ Fast loading with smooth animations
• 🧬 Bioinformatics-focused sections
• 📄 CV and blog sections
• 🔧 Easy to customize

• Use markdown headings (## and ###) to structure your content
• Add links with [text](url) syntax
• Include code blocks with triple backticks
• Use bold for emphasis
• Separate sections with --- horizontal rules