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Starred repositories

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Diffeomorphic Registration using Deformetrica Library with some additional functionality and python utility files

C++ 2 1 Updated Apr 19, 2017

Creating a 3D Shape Atlas

Python 5 Updated Jul 28, 2023

A Python library for biomedical statistical shape and appearance modelling.

Python 37 2 Updated Aug 21, 2025

Menpo's 2D deformable modelling toolkit (AAMs/CLMs/SDMs)

Python 132 62 Updated May 7, 2024

Open mesh-to-mesh registration framework

C++ 85 24 Updated Jun 16, 2025

Dynamic Neural Surfaces for Elastic 4D Shape Representation and Analysis

MATLAB 7 2 Updated Dec 4, 2024

An open-source, free comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging studies. This software called Slicer Shape AnaLysis Toolbox (Sli…

Python 67 24 Updated Jan 8, 2026
Python 30 6 Updated May 19, 2024
Python 46 7 Updated Dec 12, 2024
JavaScript 1 Updated Feb 8, 2021

Image analysis approaches to analyze the OAI magnetic resonance images

Jupyter Notebook 27 12 Updated Dec 19, 2024

Deformation assignment for Geometry Processing course

C++ 175 98 Updated Oct 18, 2022

Codes, supplementary materials, and visualization tools for paper "Elastic Shape Analysis of Brain Structures for Predictive Modeling of PTSD".

HTML 1 1 Updated Apr 16, 2021

Can point cloud networks learn statistical shape models of anatomies?

Python 7 2 Updated Jul 17, 2023

Scalable Image Analysis and Shape Modelling

Scala 264 65 Updated Jul 31, 2025

Framework for building Statistical Image And Shape Models

C++ 289 98 Updated Apr 6, 2022
Python 6 Updated Mar 11, 2021

Implementation of MICCAI'23: S3M: Scalable Statistical Shape Modeling through Unsupervised Correspondences

Python 18 1 Updated Jan 19, 2024

Geometric morphometrics in non-Euclidean shape spaces.

Python 49 5 Updated Jul 21, 2025

dual quaternion for 3d geometric operations

C++ 31 7 Updated Sep 13, 2025

MICCAI 2017 Paper - Optimal Transport for Diffeomorphic Registration

Python 56 12 Updated Apr 15, 2019

implementation of ICP algorithm

Python 18 2 Updated Aug 3, 2022

Pure Numpy Implementation of the Coherent Point Drift Algorithm

Python 585 123 Updated Aug 8, 2023

python implementation of basic Gaussian Process Morphable Models

Python 12 1 Updated Apr 7, 2020
Python 5 Updated Jul 4, 2024

Shape analysis has become of increasing interest to the medical community due to its potential to precisely locate morphological changes between healthy and pathological structures. SPHARM-PDM is a…

C++ 54 23 Updated Nov 4, 2025
Python 314 17 Updated Apr 14, 2024

Lightweight Python implementation of Normative Modelling

Jupyter Notebook 48 15 Updated Nov 27, 2025

Differentiable Iso-Surface Extraction Package (DISO)

Cuda 313 35 Updated May 1, 2025
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