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HelpHBAGenotyping Public
Forked from ChaissonLab/HelpHBAGenotypingSome utilities for ctyper/hba genotyping
Python UpdatedNov 19, 2025 -
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PHESANT Public
Forked from MRCIEU/PHESANTPHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank
R MIT License UpdatedOct 16, 2025 -
affy2sv Public
Forked from isglobal-brge/affy2svStructural variants calling for Affymetrix Arrays
R UpdatedOct 15, 2025 -
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mochawdl Public
Forked from freeseek/mochawdlMoChA WDL pipelines
WDL MIT License UpdatedOct 9, 2025 -
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mocha Public
Forked from freeseek/mochaMOsaic CHromosomal Alterations (MoChA) caller
C MIT License UpdatedAug 20, 2025 -
bifrost Public
Forked from pmelsted/bifrostBifrost: Highly parallel construction and indexing of colored and compacted de Bruijn graphs
C++ BSD 2-Clause "Simplified" License UpdatedAug 15, 2025 -
MetaXcan Public
Forked from hakyimlab/MetaXcanMetaXcan software and manuscript
Python Other UpdatedJul 21, 2025 -
RUFUS Public
Forked from jandrewrfarrell/RUFUSRUFUS k-mer based genomic variant detection
C++ UpdatedJul 11, 2025 -
IGV-VM Public
Forked from PankratzLab/IGV-VMBuild IGV instance that can take screenshots without a GUI or X11
Dockerfile GNU General Public License v3.0 UpdatedJul 1, 2025 -
summary-gwas-imputation Public
Forked from hakyimlab/summary-gwas-imputationharmonization, liftover, and imputation of summary statistics from GWAS
Python MIT License UpdatedMay 20, 2025 -
CytoGPS Public
Forked from i2-wustl/CytoGPSCytoGenetic Pattern Sleuth (CytoGPS) is a software tool to parse semi-structured ISCN-based karyotypes in text formats. This Java-based software was developed using ANTLR (ANother Tool for Language…
Java UpdatedMar 4, 2025 -
peddy Public
Forked from brentp/peddygenotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF
Jupyter Notebook MIT License UpdatedDec 23, 2024 -
hugo-theme-gallery Public
Forked from nicokaiser/hugo-theme-galleryGallery Theme for Hugo
JavaScript MIT License UpdatedDec 9, 2024 -
ggideogram Public
Forked from dxsbiocc/ggideogramggideogram is a ggplot2 extension package for drawing chromosome diagrams
R MIT License UpdatedNov 29, 2024 -
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long-read-plot Public
Exploratory plots for long read sequencing data
R GNU General Public License v3.0 UpdatedJun 24, 2024 -
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unialigner Public
Forked from seryrzu/unialignerC++ BSD 3-Clause "New" or "Revised" License UpdatedApr 9, 2024 -
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TT-Mars Public
Forked from ChaissonLab/TT-MarsStructural Variants Assessment Based on Haplotype-resolved Assemblies
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 21, 2024 -
Sniffles Public
Forked from fritzsedlazeck/SnifflesStructural variation caller using third generation sequencing
Python MIT License UpdatedJan 12, 2024 -
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samplot Public
Forked from ryanlayer/samplotPlot structural variant signals from many BAMs and CRAMs
Python MIT License UpdatedNov 27, 2023
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