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putriimnida/README.md

Hi, I'm Putri!

🎓 Master student in Medical Genomics at the University of Toronto
🏥 Bioinformatics research summer student at UHN - Princess Margaret Cancer Centre
💻 Passionate beginner in Human Genomics & Bioinformatics
🔬 Currently exploring single-cell RNA sequencing and spatial transcriptomics, especially in the context of cancer genomics

🧠 Tech Stack

Programming & Scripting

R Bash Nextflow

Bioinformatics Tools & Libraries

BioMart Bioconductor Cytoscape Tidyverse Seurat
and many more.

Development & Workflow Environment

VS Code

Version Control & Workflow Automation

Git GitHub

🚀 Current Projects

📌 Drug Repurposing for Acute Myeloid Leukemia – Presented at ACMG 2025
📌 Automation of in silico Vaccine Design for Avian Influenza on Nextflow; modified for Measles and Rubella
📌 scRNAseq and spatial transcriptomics on T-cell Lymphoma

📩 Let's Connect!

LinkedIn Email

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  1. Drug-repurposing-for-AML Drug-repurposing-for-AML Public

    Project on drug repurposing for Acute Myeloid Leukemia

    R 1 1

  2. Seurat_scRNAseq_PBMC Seurat_scRNAseq_PBMC Public

    Quality control, analysis, and exploration of scRNA-seq data using the Seurat package on a dataset of 2,700 peripheral blood mononuclear cells (PBMCs)

  3. h5n1-insilico-vaccine-epitopes h5n1-insilico-vaccine-epitopes Public

    H5N1 in silico vaccine design automation project

    HTML 1