Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data

Line Bot TCR

immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.

📚 Tools and databases for analyzing HLA and VDJ genes.

[DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.

A user friendly RabbitMQ library written in Golang.

A Parity Substrate runtime implementation of a simple Token Curated Registry (TCR)

Curated list of awesome Token Curated Registry (TCR) resources.

Large language modeling applied to T-cell receptor (TCR) sequences.

Stitchr - a Python script to stitch together coding TCR nucleotide sequences from V, J, and CDR3 info

Information and instructions for trying TCR workflow (test && commit || revert)

FrameDiPT: an SE(3) diffusion model for protein structure inpainting

TEIM: TCR-Epitope Interaction Modeling

code repository for Lagattuta et al. "Repertoire analyses reveal T cell receptor sequence features that influence T cell fate." Nat. Imm. (2022)

A react.js frontend for Substrate TCR runtime.

TCR kata repository for the Software Craft Luxembourg Community Autumn Camp 2022

BASIC: BCR and TCR assembly from single cell RNA-seq

An ultra-sensitive and precise tool for characterizing T cell CDR3 sequences in TCR-seq and RNA-seq data.

LIN3-TCR / CHIVAS

Analysis functions for deep sequenced immune repertoire (Repseq) datasets in R