B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework
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Dec 2, 2025 - Nextflow
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immcantation
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Code and scripts used for Worth et al. 2022: "Receptor editing constrains development of phosphatidyl choline-specific B cells in VH12-transgenic mice".
r ngs immunology rep-seq ngs-analysis vdj-recombination ngs-pipeline b-cell immcantation transgene b-cell-receptor mus-musculus
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May 24, 2022 - R
TyCHE is a Bayesian phylogenetics BEAST2 package that infers time trees of populations with distinct evolutionary rates.
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Dec 16, 2025 - Java
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