🏆 #1 Multi-LLM consensus framework | 550+ stars | 95% accuracy | 10+ LLM providers | Leading cell annotation tool

represent each cell in UMAP plots as a pie chart

A Snakemake workflow for analysing single cell data obtained from Cell ranger platform using Seurat package

Seurat to AnnData conversion

Tools, wrappers, utilities, and resources for handling single-cell and spatial transcriptomics data

Transcriptional and epigenetic signature of muscle tissue cells linked to atrophy

Predict the celltype of a cluster from Seurat FindMarker data

Visualize Marker Expression as violin plots and on a UMap. To be used after Seurat.Clustering

Multiome (RNA+ATAC from same cell) data generated by Qinyu Zhang in David Bryder's lab. Paper here: https://doi.org/10.7554/eLife.91826.2