A robust & multipurpose Graph object for JavaScript & TypeScript.

Feature extraction and linking of multiplexing data.

Windows inside a Docker container.

Tools to visualize and annotate big clusterings

Web-based dense annotation tool for connectomics

Big FeaTure Aligner: a scalable solution for feature alignment

NeuronProofreader is a Python library for automated proofreading of split and merge mistakes in neuron reconstructions.

The Zebrafish Activity Prediction Benchmark measures progress on the problem of predicting cellular-resolution neural activity throughout an entire vertebrate brain.

The Airport extension for DuckDB, enables the use of Arrow Flight with DuckDB

WebGL-based viewer for volumetric data

A fully scalable robust image feature extraction library.

Hypergraph Rewriting System

Custom WebGL Zarr layer for Mapbox and Maplibre

Exploring Cloud-Native Geospatial Formats: A Hands-on Workshop for Raster Data

My #30DayMapChallenge 2024

The best OSS video generation models, created by Genmo

Create web-based OME-Zarr galleries

S3 Proxy Service

Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data

Solving the Traveling Salesman Problem using Self-Organizing Maps

visually compact binary data

serial section multibeam scanning electron microscopy volume alignment

Comparative Connectomics of Public and In Progress Drosophila Datasets

A curated list of projects related to the reMarkable tablet

StarGAN v2 - Official PyTorch Implementation (CVPR 2020)

BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences

Python particle tracking toolkit