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Biozentrum, University of Basel & SIB Swiss Institute of Bioinformatics / ELIXIR Switzerland
- Basel, Switzerland
- https://orcid.org/0000-0002-3468-0652
Highlights
- Pro
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pacific-analytics-ch Public
Placeholder website for pacificanalytics.ch
CSS MIT License UpdatedNov 27, 2025 -
harbor-helm Public
Forked from goharbor/harbor-helmThe helm chart to deploy Harbor
Mustache Apache License 2.0 UpdatedNov 4, 2025 -
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task-execution-schemas Public
Forked from ga4gh/task-execution-schemasApache License 2.0 UpdatedFeb 10, 2025 -
biohackathon-projects-2024 Public
Forked from elixir-europe/biohackathon-projects-2024Project code for BioHackathon Europe 2024.
UpdatedOct 29, 2024 -
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TESK Public
Forked from elixir-cloud-aai/TESKGA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes
Python Apache License 2.0 UpdatedMay 9, 2024 -
workflow-execution-service-schemas Public
Forked from ga4gh/workflow-execution-service-schemasThe WES API is a standard way to run and manage portable workflows.
Apache License 2.0 UpdatedApr 29, 2024 -
V-pipe Public
Forked from cbg-ethz/V-pipeV-pipe is a pipeline designed for analysing NGS data of short viral genomes
Jupyter Notebook Apache License 2.0 UpdatedMar 6, 2024 -
test-git-flow Public
Testing Git flow with clean linear commit history based on a main, dev and feature branches
Apache License 2.0 UpdatedNov 30, 2023 -
cwltool Public
Forked from common-workflow-language/cwltoolCommon Workflow Language reference implementation
Python Apache License 2.0 UpdatedOct 4, 2023 -
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cwl-tes Public
Forked from athenarc/cwl-tescwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.
Python Apache License 2.0 UpdatedFeb 8, 2023 -
Testing how Flask and Connexion could be patched to allow type inferences for FOCA config.
Python MIT License UpdatedJan 3, 2023 -
git-management Public
Scripts & cookiecutters to interact with Git repository hosting services
Python Apache License 2.0 UpdatedJun 20, 2022 -
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msa_group_compare Public
Forked from CompEpigen/msa_group_compareWorkflow to compare two sequence groups by multiple sequence alignment and distance tree
Common Workflow Language UpdatedJun 9, 2020 -
cwl-example-workflows Public
Forked from fgypas/cwl-example-workflowsExample workflows written in CWL
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fair-rna Public
FAIR Tools in RNA Bioinformatics
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wes-test-workflow-attachment Public
Verify that the workflow attachment parameter of a GA4GH WES implementation is functional
Common Workflow Language Apache License 2.0 UpdatedMay 13, 2020 -
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RD_pipeline Public
Forked from jarnolaitinen/RD_pipelineCWL WES-TES
Common Workflow Language GNU Lesser General Public License v3.0 UpdatedMay 28, 2019 -
cwl-tes-temp Public
Temporary fork of unmerged, inaccessible pull request providing OAuth2 support; manually edited
Python Apache License 2.0 UpdatedMay 22, 2019 -
gsoc-2017 Public
Forked from sib-swiss/gsoc-2017A website that showcases interesting projects!
HTML GNU Affero General Public License v3.0 UpdatedFeb 2, 2017