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funcprofiler Public
Forked from nickp60/funcprofilerRead-based functional profiling of microbiome sequencing data
Nextflow MIT License UpdatedFeb 26, 2026 -
test-datasets Public
Forked from nf-core/test-datasetsTest data to be used for automated testing with the nf-core pipelines
MIT License UpdatedFeb 20, 2026 -
modules Public
Forked from nf-core/modulesRepository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow MIT License UpdatedFeb 19, 2026 -
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Accompanying code to manuscript.
Jupyter Notebook MIT License UpdatedNov 14, 2025 -
metaphor Public archive
Metaphor: a general-purpose workflow for assembly and binning of metagenomes
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Workshop website for the MIG Python workshop at the Florey
HTML Other UpdatedApr 3, 2024 -
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Analysis notebooks for the Metaphor manuscript.
Jupyter Notebook MIT License UpdatedJun 14, 2023 -
2023-05-09-unimelb-swc Public
Workshop repository for the Software Carpentry workshop at UniMelb, May 2023.
HTML Other UpdatedMay 9, 2023 -
my-recipe-source Public
Example repository to demonstrate how to build a conda recipe.
Makefile UpdatedMay 4, 2023 -
Workshop repository for the Data Carpentry Genomics workshop at UniMelb, April 2023.
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mg-example-data Public
Example metagenomics data
Creative Commons Zero v1.0 Universal UpdatedMar 28, 2023 -
SynechococcusGT Public
Synechococcus genomic taxonomy 🌱🔬
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bpb Public archive
Boas Práticas Bot
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python-analise-de-dados Public
Workshop de análise de dados com Python da The XLab.
HTML Other UpdatedOct 14, 2021 -
BioProv Public
A provenance library for bioinformatics workflows 🧬 🔀 📝
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abacat Public archive
🥑 A Bacterial genome Comparison and Annotation Toolkit
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example-python-project Public
A typical Python package that needs some TLC.
Jupyter Notebook UpdatedMay 31, 2021 -
COG-translator Public
🧬 ↩️ Easy conversion between NCBI COG names and codes
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SynechococcusPreprint Public
Synechococcus genomic taxonomy 🌱🧬
Jupyter Notebook MIT License UpdatedMay 14, 2020 -
complex_networks Public
A repository for my work in the Complex Networks course at COPPE
Jupyter Notebook UpdatedDec 20, 2019 -
sparkmer-count Public
k-mer counting with Spark ✨
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awesome-microbiome-stats Public
🧮🦠 A curated list of papers on microbiome statistical analysis and tools.
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CursoCCB Public
Forked from Grupo-de-Oceanografia-Costeira/CursoCCBRepositório contendo arquivos do Curso de Programação e Computação Científica para Biólogos
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