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maftools Public
Forked from PoisonAlien/maftoolsSummarize, Analyze and Visualize MAF files from TCGA or in-house studies.
R MIT License UpdatedApr 29, 2025 -
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machine-learning-zoomcamp Public
Forked from DataTalksClub/machine-learning-zoomcampLearn ML engineering for free in 4 months!
Jupyter Notebook UpdatedNov 8, 2024 -
Africans specific ancestry informative SNPs
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ChIP-seq-analysis Public
Forked from crazyhottommy/ChIP-seq-analysisChIP-seq analysis notes from Ming Tang
Python MIT License UpdatedAug 5, 2024 -
Books_dataScience Public
Forked from varunkashyapks/BooksBooks related to AI/ML/DL/GENAI
UpdatedJul 17, 2024 -
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modules Public
Forked from envmodules/modulesEnvironment Modules: provides dynamic modification of a user's environment
Tcl GNU General Public License v2.0 UpdatedJun 13, 2024 -
BookCode_Edition1 Public
Forked from BayesianModelingandComputationInPython/BookCode_Edition1Jupyter Notebook GNU General Public License v2.0 UpdatedMay 14, 2024 -
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Genome-Analyses Public
Test scripts for H3Africa Cross-Consortium Genome Analyses
Shell UpdatedNov 16, 2023 -
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hpp_pangenome_resources Public
Forked from human-pangenomics/hpp_pangenome_resourcesUpdatedOct 18, 2023 -
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fastq-dl Public
Forked from rpetit3/fastq-dlDownload FASTQ files from SRA or ENA repositories.
Python MIT License UpdatedAug 11, 2023 -
Guide-to-manipulating-PLINK-EIG-and-VCF-files Public
Forked from ACAD-UofA/Guide-to-manipulating-PLINK-EIG-and-VCF-filesA guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert between formats, merge datasets or subset by individuals in ea…
Shell UpdatedAug 9, 2023 -
gatk Public
Forked from broadinstitute/gatkOfficial code repository for GATK versions 4 and up
Java Other UpdatedMay 3, 2023 -
GenoTools Public
Forked from GP2code/GenoToolsA suite of tools for processing genotype data. Includes calling genotypes from .idat to plink (ped), sample/case-control variant QC steps, ancestry estimation. UNDER DEVELOPMENT
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sib-swiss-training-collection Public
Forked from sib-swiss/training-collectionCollection of bioinformatics training materials
Other UpdatedFeb 10, 2023 -
Biocontainers Public
Forked from BioContainers/containersBioinformatics containers
Dockerfile Apache License 2.0 UpdatedFeb 10, 2023 -
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mathematical_modeling_of_biology_system Public
Forked from aaditya-pdgupta/mathematical_modeling_of_biology_systemThis project has been engaged in the use of mathematical modeling in the Gene Regulatory System (GRN). Different mathematical models that are inspired in gene regulatory network such as Central dog…
Jupyter Notebook UpdatedAug 22, 2022 -
post-GWAS-pipeline Public
Forked from yiminghu/post-GWAS-pipelineA comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data
Python MIT License UpdatedAug 2, 2022 -
js4ds Public
Forked from software-tools-books/js4dsJavaScript for Data Science
TeX Other UpdatedJul 6, 2022 -
LocusExplorer Public
Forked from oncogenetics/LocusExplorerAn interactive graphical illustration of genetic associations and their biological context
R MIT License UpdatedJul 5, 2022 -
SkeeterBuster Public
Forked from helmingstay/SkeeterBusterAedes aegypti population dynamics simulation model.
C++ GNU General Public License v3.0 UpdatedMay 10, 2022
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