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User-friendly AI Interface (Supports Ollama, OpenAI API, ...)

Python 124,287 17,563 Updated Feb 18, 2026

The bridge between the NCBI Gene Expression Omnibus and Bioconductor

R 105 39 Updated Nov 24, 2025

RNA-seq aligner

C 2,141 545 Updated Mar 18, 2025

🚀🤖 Crawl4AI: Open-source LLM Friendly Web Crawler & Scraper. Don't be shy, join here: https://discord.gg/jP8KfhDhyN

Python 60,383 6,157 Updated Feb 18, 2026

Tools to process and analyze deep sequencing data.

Python 752 220 Updated Jul 23, 2025

Genomic coordinates of problematic genomic regions as GRanges

R 51 5 Updated Dec 10, 2025

Application for making ENCODE Blacklists

C++ 333 41 Updated Apr 23, 2021

MACS -- Model-based Analysis of ChIP-Seq

Python 767 271 Updated Feb 13, 2026

🥢像老乡鸡🐔那样做饭。主要部分于2024年完工,非老乡鸡官方仓库。文字来自《老乡鸡菜品溯源报告》,并做归纳、编辑与整理。CookLikeHOC.

JavaScript 23,117 2,327 Updated Oct 17, 2025

A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot

R 76 16 Updated Nov 5, 2025

A fast, clean, responsive Hugo theme.

HTML 13,116 3,337 Updated Jan 25, 2026

ComfyUI custom nodes and web utilities for real-time AI generation and interaction

Python 339 37 Updated Jan 20, 2026

Video translation and dubbing tool powered by LLMs. The video translator offers 100 language translations and one-click full-process deployment. The video translation output is optimized for platfo…

Go 9,391 807 Updated Feb 8, 2026

Official code for "F5-TTS: A Fairytaler that Fakes Fluent and Faithful Speech with Flow Matching"

Python 14,097 2,079 Updated Feb 16, 2026

所有小初高、大学PDF教材。

Roff 65,178 14,532 Updated Oct 18, 2025

a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

Python 2,067 583 Updated Feb 9, 2026

FULL Augment Code, Claude Code, Cluely, CodeBuddy, Comet, Cursor, Devin AI, Junie, Kiro, Leap.new, Lovable, Manus, NotionAI, Orchids.app, Perplexity, Poke, Qoder, Replit, Same.dev, Trae, Traycer AI…

115,071 29,675 Updated Feb 17, 2026

Materials for the Learn PyTorch for Deep Learning: Zero to Mastery course.

Jupyter Notebook 17,186 4,744 Updated Feb 11, 2026

There can be more than Notion and Miro. AFFiNE(pronounced [ə‘fain]) is a next-gen knowledge base that brings planning, sorting and creating all together. Privacy first, open-source, customizable an…

TypeScript 62,995 4,389 Updated Feb 19, 2026

Transforms complex documents like PDFs into LLM-ready markdown/JSON for your Agentic workflows.

Python 54,490 4,521 Updated Feb 9, 2026

Official Repo for "TheoremExplainAgent: Towards Video-based Multimodal Explanations for LLM Theorem Understanding" [ACL 2025 oral]

Python 1,458 193 Updated Jul 27, 2025

Open source code for AlphaFold 2.

Python 14,265 2,561 Updated Jan 15, 2026
Python 54 5 Updated Aug 16, 2024

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Python 3,627 770 Updated Oct 21, 2025

Repository of Jupyter notebook tutorials for teaching the Deep Learning Course at the University of Amsterdam (MSc AI), Fall 2023

Jupyter Notebook 3,089 671 Updated Oct 31, 2025

Unified Efficient Fine-Tuning of 100+ LLMs & VLMs (ACL 2024)

Python 67,362 8,195 Updated Feb 12, 2026

Graph Neural Network library made for Apple Silicon

Python 207 19 Updated Aug 21, 2025

Prompt, run, edit, and deploy full-stack web applications using any LLM you want!

TypeScript 19,006 10,349 Updated Feb 7, 2026

🙌 OpenHands: AI-Driven Development

Python 67,938 8,463 Updated Feb 19, 2026

A guide to running MaxQuant in Linux

Python 35 11 Updated Feb 10, 2020
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