Lists (6)
Stars
Python 3.8+ toolbox for submitting jobs to Slurm
A Snakemake executor plugin for submitting jobs to a SLURM cluster
A DSL for data-driven computational pipelines
This is the development home of the workflow management system Snakemake. For general information, see
WebGL-based viewer for volumetric data
Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. humans
DocAider is an LLM-powered repository agent designed to support developers in efficiently generating documentation through a multi-agent approach. With its integrated workflows, docAider streamline…
GUI for spikeinterface objects
Kedro is a toolbox for production-ready data science. It uses software engineering best practices to help you create data engineering and data science pipelines that are reproducible, maintainable,…
Prefect is a workflow orchestration framework for building resilient data pipelines in Python.
An orchestration platform for the development, production, and observation of data assets.
Apache Spark - A unified analytics engine for large-scale data processing
Medical imaging processing for AI applications.
🙃 A delightful community-driven (with 2,400+ contributors) framework for managing your zsh configuration. Includes 300+ optional plugins (rails, git, macOS, hub, docker, homebrew, node, php, python…
MONAI Label is an intelligent open source image labeling and learning tool.
phy: interactive visualization and manual spike sorting of large-scale ephys data
MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
Python package to handle probe layout, geometry and wiring to device.
Browser-based NWB visualization and DANDI exploration
Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF