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  • Max Planck Institute

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A simple tool to identify and clean misassemblies for ancient metagenomics

Python 8 1 Updated Aug 3, 2022

sensitive and precise assembly of short sequencing reads

C 163 15 Updated Oct 11, 2024

MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics

C 201 24 Updated Aug 25, 2025

MMseqs2: ultra fast and sensitive search and clustering suite

C 1,950 265 Updated Dec 5, 2025

This is the GitHub repository for our benchmarking study "Benchmarking of computational error-correction methods for next-generation sequencing".

Jupyter Notebook 12 7 Updated Mar 13, 2020

Confusion Matrix in Python: plot a pretty confusion matrix (like Matlab) in python using seaborn and matplotlib

Python 539 156 Updated Apr 14, 2025

Script for stripping output from ipython/jupyter scripts

Python 106 30 Updated Aug 10, 2022