Repository to host tool-specific module files for the Nextflow DSL2 community!

The uncompromising Python code formatter

Heatmap script to compare taxon abundance using output from the Wochenende pipeline

My tools for the Slurm HPC workload manager

Interactively analyze single cell genomic data

Visualization of scRNA-seq data.

A web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat v3

A DSL for data-driven computational pipelines

Nanopore demultiplexing, QC and alignment pipeline

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

Workflow for single-cell RNA-seq analysis using Seurat

Deprecated see https://github.com/MHH-RCUG/nf_wochenende : A whole Genome/Metagenome Sequencing Alignment Pipeline in Python3

Notebooks and code for the book "Introduction to Machine Learning with Python"

Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads

SDK for GPU accelerated genome assembly and analysis

A python script to export galaxy histories using bioblend

R toolkit for single cell genomics

Scripts to install as a Bioconda package for making workflows