Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3

MPBuilder provides building capability for protein-detergent, bicelle, and lipid-scaffold (saposin nanoparticles, nanodiscs) complexes and links this to the ATSAS software package modules for model…

A Snakemake executor plugin for submitting jobs to a SLURM cluster

Official repository for the Boltz biomolecular interaction models

AlphaFold 3 inference pipeline.

Package management made easy

3D Zernike Descriptors for Python

DiffModeler: a diffusion model based protein complex structure modeling tool.

Open source code for AlphaFold 2.

This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.

Cookiecutter for snakemake slurm profile

AlphaLink: Integrating crosslinking MS data into OpenFold

Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation

Structure refinement and validation for crystallography and single particle analysis

A scientific image processing software suite with a focus on CryoEM and CryoET

Start-to-end photon experiment simulation platform

A lightweight header-only library for using Keras (TensorFlow) models in C++.