Stars
A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data
Bioinformatics one liners from Ming Tang
A rust framework to make using alevin-fry even simpler
Rust wrapper for the next generation (still currently in C++)
Systematically learn and evaluate manifolds from high-dimensional data
scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data
Quantify and interpret divers of variation in multilevel gene expression experiments
Differential expression and allelic analysis, nonparametric statistics
Statistical Rethinking course winter 2022
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
Unlock your displays on your Mac! Flexible HiDPI scaling, XDR/HDR extra brightness, virtual screens, DDC control, extra dimming, PIP/streaming, EDID override and lots more!
resources for learning bioinformatics
Evaluation of the effect of quantification choices on RNA velocity estimates
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
EASTL stands for Electronic Arts Standard Template Library. It is an extensive and robust implementation that has an emphasis on high performance.
CMake BASIS makes it easy to create sharable software and libraries that work together. This is accomplished by combining and documenting some of the best practices and utilities available. This pr…