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  1. CDCgov/neissflow CDCgov/neissflow Public

    Nextflow pipeline for Neisseria gonorrhoeae isolate genome analysis

    Perl 3 2

  2. tick_surveillance tick_surveillance Public

    Forked from stenglein-lab/tick_surveillance

    Bioinformatics pipeline for analysis of amplicon sequencing of tick-associated microbes

    Nextflow

  3. CX4803-MLB-final-project-Spring-2025 CX4803-MLB-final-project-Spring-2025 Public

    Jupyter Notebook

  4. ethans-toolbox ethans-toolbox Public

    Various scripts/resources for bioinformatics and computation related tasks

    Python 1 2

  5. krakenutils krakenutils Public

    Formats a fasta file for kraken input.

    Python

  6. Donut_Falls_Ethan_Test Donut_Falls_Ethan_Test Public

    Forked from slsevilla/Donut_Falls

    Basic workflow for nanopore sequencing data

    Nextflow