Master programming by recreating your favorite technologies from scratch.

为GPT/GLM等LLM大语言模型提供实用化交互接口，特别优化论文阅读/润色/写作体验，模块化设计，支持自定义快捷按钮&函数插件，支持Python和C++等项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持chatglm3等本地模型。接入通义千问, deepseekcoder, 讯飞星火, 文心一言, llama2, rwkv, claude2, m…

Paired Replicate Analysis of Allelic Differential Splicing Events

Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.

Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders

Differential analysis of RNA-Seq

The ViennaRNA Package

A tool for estimating repeat sizes

Scripts for analyzing PacBio AAV sequences

RSEM: accurate quantification of gene and isoform expression from RNA-Seq data

Style guides for Google-originated open-source projects

A web interface to extract tabular data from PDFs

Structural variation caller using third generation sequencing

pbsv - PacBio structural variant (SV) calling and analysis tools

Scalable genomic data analysis.

此项目是机器学习(Machine Learning)、深度学习(Deep Learning)、NLP面试中常考到的知识点和代码实现，也是作为一个算法工程师必会的理论基础知识。

Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae Kyung Im, Jonathan K. Pritchard

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Multi-nucleotide variants (MNVs) in gnomAD 2.1

Productivity Tools for Plotly + Pandas

Count bases in BAM/CRAM files

Classifier for metagenomic sequences

A deep learning-based tool to identify splice variants

Plotting scripts for long read sequencing data

Camelot: PDF Table Extraction for Humans

P-NET, Biologically informed deep neural network for prostate cancer classification and discovery

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)