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  • Meiji Univ.
  • Kanagawa-Kawasaki

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Showing results

A dynamic database of fungal trait measurements

R 82 9 Updated Feb 26, 2020

An efficient and objective tool for optimizing microbiome rRNA gene trimming parameters

Python 94 26 Updated Jul 12, 2024

R package for multiple sequence alignment

C 23 13 Updated Nov 11, 2025

A template plugin for obsidian

TypeScript 4,417 268 Updated Dec 17, 2025

Sync your Kindle notes and highlights directly into your Obsidian vault

TypeScript 1,185 81 Updated Jul 10, 2024

Integrate consoles, shells, and terminals.

TypeScript 345 31 Updated Dec 12, 2025

An open-source AI agent that brings the power of Gemini directly into your terminal.

TypeScript 88,186 10,116 Updated Dec 21, 2025

Insert and import citations, bibliographies, notes, and PDF annotations from Zotero into Obsidian.

TypeScript 1,442 74 Updated Aug 11, 2024

The tidyverse style guide for R code

SCSS 349 120 Updated Dec 5, 2025

The R Installation Manager

Rust 850 30 Updated Dec 15, 2025

Accurate sample inference from amplicon data with single nucleotide resolution

R 530 160 Updated Dec 15, 2025

Call LLM APIs from R

R 567 114 Updated Dec 19, 2025

'ggplot2' Based Publication Ready Plots

R 1,225 180 Updated Oct 19, 2025

Easy interactive web applications with R

R 5,576 1,878 Updated Dec 16, 2025

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

C++ 2,254 366 Updated Nov 23, 2025

🦠 A comprehensive R package for deep mining microbiome

R 190 36 Updated Nov 3, 2025

Check whether a package is ready for submission to rOpenSci's peer-review system

R 27 16 Updated Dec 16, 2025

πŸ–οΈ R package for colored terminal output β€” now superseded by cli

R 324 38 Updated Oct 21, 2025

Parser and annotation tools using the FAPROTAX database (Louca S. et al., 2016)

R 8 2 Updated Apr 8, 2022

FUNGuild: parsing OTUs into functional guilds

Python 124 80 Updated Apr 26, 2024

GUI image optimizer for Mac

HTML 9,656 450 Updated Oct 29, 2023

Tidy Plots for Scientific Papers

R 639 26 Updated Dec 17, 2025

Teach Yourself CS - Japanese

178 6 Updated Jan 22, 2025

my presentation of VS Code Conference Japan 2021

Vue 2 Updated Feb 7, 2022

Building R packages

R 934 642 Updated Dec 21, 2025

A curated list of awesome alfred workflows

3,175 130 Updated Aug 8, 2024

πŸ“š Freely available programming books

Python 379,145 65,634 Updated Dec 16, 2025

A conda-forge distribution.

Shell 9,027 461 Updated Dec 6, 2025

The Fast Cross-Platform Package Manager

C++ 7,836 423 Updated Dec 17, 2025

SRA Tools

C 1,286 269 Updated Dec 19, 2025
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