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1. mahmoodlab/CRANE mahmoodlab/CRANE Public

   Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine

   Python 34 9

2. GliomaSolver GliomaSolver Public

   Solver for simulating tumor growth and mass effect in patient brain anatomy

   C++ 27 12

3. s3 s3 Public

   Skull stripping and brain tissue segmentation

   Python 121 16

4. dicomRT2nii dicomRT2nii Public

   Converts radiotherapy plans to nifty

   MATLAB 6

5. Registration Registration Public

   Image registration using ANTs

   Shell 3

6. SSM SSM Public

   Stochastic Simulation Methods

   C++ 5 1