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A long-read RNA-seq internal priming detection and filtering tool

Rust 2 Updated Jan 10, 2026
Python 12 Updated Jan 6, 2026

AWS CloudFormation templates for deploying Nextflow infrastructure

Python 6 28 Updated Jan 8, 2026

A collection of genomics software tools written in Rust

93 6 Updated Jan 11, 2026

PMI DRC data repositories and APIs

Python 42 17 Updated Jan 9, 2026

Updated and optimized fork of BSMAP

C 23 8 Updated Dec 28, 2020

2026年1月更新,目前国内可用Docker镜像源汇总,DockerHub国内镜像加速列表,🚀DockerHub镜像加速器

7,083 339 Updated Dec 16, 2025

Ultra-fast preprocessing and quality control for long-read sequencing data

C++ 213 14 Updated Sep 6, 2025
C 26 1 Updated Nov 14, 2025

所有小初高、大学PDF教材。

Roff 64,012 14,258 Updated Oct 18, 2025

Extract methylation calls from long reads (ONT/ PacBio)

Nextflow 19 6 Updated Dec 19, 2025
JavaScript 2 Updated Apr 9, 2025
Nextflow 2 Updated May 9, 2025

Call select base modifications in PacBio HiFi reads

15 Updated Nov 11, 2025

ML methods for m6A-calling

Jupyter Notebook 5 1 Updated Apr 18, 2024

A Snakemake workflow for calling Fiber-seq Inferred Regulatory Elements (FIREs) on single molecules.

Python 28 5 Updated Nov 12, 2025

A simplified version of Dorado built on top of S/BLOW5 format.

C++ 28 12 Updated Jan 12, 2026
Nextflow 8 Updated May 15, 2025

Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project

R 147 27 Updated Aug 25, 2025

longcallR_nn is a variant caller specifically designed for long-read RNA-seq data, utilizing a ResNet50 model.

Rust 7 Updated Jan 6, 2025

V2rayU,基于v2ray核心的mac版客户端,用于科学上网,使用swift编写,支持trojan,vmess,shadowsocks,socks5等服务协议,支持订阅, 支持二维码,剪贴板导入,手动配置,二维码分享等

19,759 2,954 Updated Jan 8, 2026

A GUI client for Windows, Linux and macOS, support Xray and sing-box and others

C# 94,386 14,011 Updated Jan 10, 2026

Mamba SSM architecture

Python 16,927 1,565 Updated Jan 9, 2026

A bioinformatics tool for viewing and calculating base modification frequencies from BAM files

C 40 1 Updated Dec 24, 2025

Collect raw signal event samples for k-mers from an event alignment file

C++ 8 Updated Jun 9, 2025

BaseNet: A Transformer-Based Toolkit for Nanopore Sequencing Signal Decoding

Python 13 1 Updated Aug 27, 2025

A library of free open source icons for science illustrations in biology and chemistry

Vue 1,594 91 Updated Jan 7, 2026

"nanoCEM" is a simple tool designed to visualize the features that distinguish between two groups of ONT data at the site level.

Python 17 2 Updated Oct 13, 2025
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