RNA_CTF

A simplified all-atom molecular dynamics framework to simulate RNA co-transcriptional folding (CTF).

Usage

Step1: Just put the Fortran code in code folder into the pmemd source code folder in Amber18 ($AMBERHOME/src/pmemd/src), then recompile pmemd.

Step2: Perform CTF simulations by runing the command sbatch ctf.sh in your computing cluster.

Name		Name	Last commit message	Last commit date
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code		code
data		data
run		run
README.md		README.md