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modules Public
Forked from nf-core/modulesRepository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow MIT License UpdatedMay 30, 2022 -
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ncov-tools Public
Forked from jts/ncov-toolsSmall collection of tools for performing quality control on coronavirus sequencing data and genomes
Python MIT License UpdatedJan 4, 2022 -
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This repo is created for a custom analysis which involves sequencing target sequence which are very short (11-23bp long) being amplified by a set of primers from the system of interest (bacteria cu…
Python MIT License UpdatedNov 23, 2021 -
Spoon-Knife Public
Forked from octocat/Spoon-KnifeThis repo is for demonstration purposes only.
HTML UpdatedOct 26, 2021 -
rnaseq Public
Forked from nf-core/rnaseqRNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Nextflow MIT License UpdatedOct 18, 2021 -
ncov2019-artic-nf Public
Forked from connor-lab/ncov2019-artic-nfA Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019
Nextflow GNU Affero General Public License v3.0 UpdatedSep 29, 2021 -
primer-schemes Public
Forked from artic-network/primer-schemesPrimer schemes for real-time genome epidemiology
Python Creative Commons Attribution 4.0 International UpdatedJul 10, 2021 -
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nextflow-cli-template Public template
Forked from eharkins/nextflow-cli-templateA template repository for running a Python CLI using Nextflow.
Python UpdatedDec 12, 2019