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Pancreon

Channelome profiling in PANC-1 cell line

Dependencies

Bash

  • kerblam (>= 1.0.0-rc.1)
  • x.FASTQ (>= 2.0.0)

R

  • ggplot2 (>= 3.5.0)
  • dplyr (>= 1.1.4)
  • r4tcpl (>= 1.5.1)
  • readABF (>= 1.0.2)
  • RSQLite (>= 2.3.5)
  • DBI (>= 1.2.3)

Run the analysis

kerblam data fetch
kerblam run make_geneset
kerblam run quality
kerblam run profiler
kerblam run currents

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Channelome profiling and whole-cell current analysis in PANC-1 cell line

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