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Whole-brain comparison of rodent and human brains using spatial transcriptomics

TeX 4 2 Updated Nov 23, 2022

Data and tools from the publication "Evolution of Cortical Geometry and its Link to Function, Behaviour and Ecology" by Schwartz et al. for mapping values defined on cortical surfaces between speci…

Shell 13 3 Updated Feb 3, 2025

Spatial Analysis of ISH Brain Slice Data

Jupyter Notebook 7 2 Updated Jan 23, 2024

gitmarklet: Brief summaries of scientific papers I've read indexed via Github Issues

HTML 8 4 Updated May 4, 2021

Check metadata and visualize neuroimages within VSCode.

TypeScript 45 6 Updated Apr 29, 2023

Convert NIfTI-format atlases to Surface MZ3 meshes

MATLAB 10 5 Updated Dec 9, 2020

Connectome Computation System

MATLAB 81 44 Updated Sep 12, 2024

Data and code in support of Hansen et al., 2022, NeuroImage "Correspondence between gene expression and neurotransmitter receptor and transporter density in the human brain"

Python 5 2 Updated Oct 13, 2022

Review the challenges and potential of ARM-based Apple Silicon macOS for brain imaging research

C 271 15 Updated Jul 29, 2025

A Graph-theoretical Network Analysis Toolkit in MATLAB

MATLAB 79 32 Updated Apr 9, 2019

Meshfix 1.2-alpha by Marco Attene with Linux makefile

C++ 7 5 Updated May 29, 2025

ciftiTools R package

HTML 52 10 Updated Aug 24, 2025

Vogt-Bailey index toolbox in Python

Python 12 13 Updated May 15, 2025