- https://github.com/TrynkaLab/Perez_Alcantara_pooled_iMGL
- https://github.com/TrynkaLab/VIDRA
- https://github.com/TrynkaLab/washer_et_al_microglia_media
- https://github.com/TrynkaLab/Omenn_paper
- https://github.com/TrynkaLab/Treg_Multiomics
- https://github.com/TrynkaLab/T-cell-costimulation
- tglow-r (R package for HCI analysis): https://github.com/TrynkaLab/tglow-r
- poodleR (Donor unmixing using least squares): https://github.com/TrynkaLab/poodleR
- ProliferationAnalysis (FACS proliferation analysis of complex mixtures in R): https://github.com/TrynkaLab/ProliferationAnalysis
- sc-blipper (Single cell post-processing running cNMF, gene set enrichments): https://github.com/TrynkaLab/sc-blipper
- CHEERS (genetic enrichment of chromatin peaks): https://github.com/TrynkaLab/CHEERS