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@wokenny13
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This PR focuses on the updates that have been made to TADA_CreateParamRef and TADA_CreateUseParamRef

(Next pull request will focus on the additional Spatial crosswalks and TADA_DefineCriteriaMethodology functions. Excluded those functions from this PR.)

In this PR please look through:

  • TADA Module 3a vignette updates
  • Review the new arg input for TADA_CreateParamRef(fillBy = "None", "Org" and "All)
  • Review the new arg input for TADA_CreateUseParamRef(auto_assign = TRUE/FALSE)
  • R documentation for these two functions and the examples
  • The excel file export option and if there are any issues with the flagging columns, usability, dropdown lists, etc.

This creates DefineMagnitude in which is the dataframe users will define Magnitude Criteria components
Fixed some formatting with the DefineMagnitude output table and other Continued developments.
DefineMagnitude format has been updated. Minor bug fix in TADA_CreateParamRef() was fixed.
need to review logic in summary output and handling of empty column cases and how to best summarize impairments
Define Magnitude Excursion Summary
Summary of magnitude excursions edits with formatting and logic are also included in this commit.
Renamed paramUseRef argument to useParamRef
Removed duplicate TADA functions that were moved around from different branches.
Adding WaterType column and consider renaming of function.
New required argument inputs. WaterType column will be included in this output. ATTAINS.ParameterName column added as well.

Users will need to specify unique spatial criteria for a Param-Use-WaterType during this function.
chunk size and blank space in URL handling
wokenny13 and others added 3 commits June 11, 2025 11:18
This typo (missing period) caused the fillBy = Org to return a bug.

Fixed this issue.
…-Updates' of https://github.com/USEPA/EPATADA into Module-3-TADA_CreateParamRef-and-TADA_CreateUseParamRef-Updates
wokenny13 and others added 3 commits June 11, 2025 11:35
…-Updates' of https://github.com/USEPA/EPATADA into Module-3-TADA_CreateParamRef-and-TADA_CreateUseParamRef-Updates
Removed rATTAINS dependency and replaced use cases with rExpertQuery

Removed irrelevant Example dataframes in this PR

Modified Mod3a vignette
explicitly named each dataframe to reflect what each dataframe is showing from each TADA mod 3 function and its arg inputs.

Fixed a small bug in flagging column for TADA_CreateUseParamRef

Removed EPA304a section as this was moved to only be shown in the final CriteriaMethods table (still in draft)
‘Data_Nutrients_UT_GetATTAINS’ ‘Data_WV_Mod1_Output_GetATTAINS’

as these are not relevant to this PR
@wokenny13
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I updated the vignette to make the names of the crosswalk example data frames functionality more explicit and fixed some small flagging bugs so that everything should be working as intended.

I kept the function names and argument input the same for now and we can consider more appropriate new names. We can also consider the flagging columns in both functions and see if they can be reworded in any way for better clarity.

This should be in a good spot for a more final review now.

@cristinamullin
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I changed fillBy to auto_assign in TADA_CreateParamRef for consistency.

@wokenny13 I added one comment about the figures. Once that is addressed, this can be merged. Great work!!

@cristinamullin cristinamullin linked an issue Jun 17, 2025 that may be closed by this pull request
Changed title of mod 3 workflow images to WQP 'Analysis'
@cristinamullin cristinamullin merged commit bc4db50 into develop Jun 18, 2025
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@cristinamullin cristinamullin deleted the Module-3-TADA_CreateParamRef-and-TADA_CreateUseParamRef-Updates branch June 18, 2025 18:50
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