Chaos Game Representation for Twin Contrastive Clustering of Unlabelled DNA Sequences

A parallel implementation of gzip for modern multi-processor, multi-core machines.

Chromosome-level synteny plotting using orthologous regions

Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, etc.).

AlphaFold 3 inference pipeline.

In silico multi-antigen sequence typing for Neisseria gonorrhoeae (NG-MAST)

Hexagonal hierarchical geospatial indexing system

Prac notes and code for the Center for Biodiversity Analysis hosted workshop on the Gen3sis simulation software

Repository of the R-packageGen3sis

Tools for fiberseq data written in rust.

Code-base to identify fungal pheromones from genome sequences. Written for publication being prepared from the Murray Lab

Plot ideogams and simple gene tracks with matplotlib

Simple Python version management

a tool for designing primer panels for multiplex PCR.

Computational Discovery on Jupyter Open Educational Resource by Neil J. Calkin, Eunice Y. S. Chan, and Robert M. Corless

python module to plot beautiful and highly customizable genome browser tracks

Quickly search, compare, and analyze genomic and metagenomic data sets.

Collection of handy online tools for developers, with great UX.

Read-based phasing of genomic variants, also called haplotype assembly

Implement a ChatGPT-like LLM in PyTorch from scratch, step by step

distributed, likelihood-free inference

程序员鱼皮原创项目，免费的闯关交互式 SQL 自学教程网站，从零基础到进阶，带你掌握常用 SQL 语法（MySQL、SQLite、PostgreSQL）、快速学习 SQL 和数据库。支持在线SQL编辑器、实时查询结果、语法高亮、SQL运行广场等功能。纯前端实现，简单易学~

A curated list of awesome C++ (or C) frameworks, libraries, resources, and shiny things. Inspired by awesome-... stuff.

how to optimize some algorithm in cuda.

a simple template to write your CV in a readable markdown file and use CSS to publish/print it.

📄 Easily create your resume with Markdown on VSCode / Typora / Obsidian

150+ HTML5 Website Templates

Recombination Landscape Estimation using Recurrent Neural Networks

Generate a pixel art style profile card from your GitHub data! ✨

Evolutionary Scale Modeling (esm): Pretrained language models for proteins