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Janelia Research Campus, HHMI
- Ashburn, VA
- https://orcid.org/0000-0002-9441-2908
- @mzouink
- in/zouinkhi
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fly-organelles Public
Forked from saalfeldlab/organelle-mappingJupyter Notebook MIT License UpdatedDec 1, 2025 -
dacapo-toolbox Public
Forked from pattonw/dacapo-toolboxHelper functions for using `DaCapo`
Python UpdatedSep 26, 2025 -
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bigdataviewer Public
Forked from bigdataviewer/bigdataviewer-coreImgLib2-based viewer for registered SPIM stacks and more
Java BSD 2-Clause "Simplified" License UpdatedSep 8, 2025 -
scijava-links Public
Forked from scijava/scijava-linksURI scheme handlers in SciJava
Java BSD 2-Clause "Simplified" License UpdatedSep 8, 2025 -
scijava-common-link Public
Forked from scijava/scijava-commonA plugin framework and application container with built-in extensibility mechanism 🔌
Java BSD 2-Clause "Simplified" License UpdatedSep 8, 2025 -
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segmentation-challenge-deploy Public
Forked from 2i2c-org/frx-challenges-deployThis repository contains the code to deploy the 2i2c FRX Challenges helm chart for the segmentation challenge.
Python BSD 3-Clause "New" or "Revised" License UpdatedJan 30, 2025 -
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funlib.persistence Public
Forked from funkelab/funlib.persistenceInterfaces for data (arrays and graphs) and storage formats (databases and file formats)
Python MIT License UpdatedNov 22, 2024 -
dacapo Public
Forked from janelia-cellmap/dacapoA framework for easy application of established machine learning techniques on large, multi-dimensional images.
Python BSD 3-Clause "New" or "Revised" License UpdatedNov 22, 2024 -
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funlib.show.neuroglancer Public
Forked from funkelab/funlib.show.neuroglancerScripts and helpers for the neuroglancer WebGL viewer.
Python UpdatedAug 30, 2024 -
daisy Public
Forked from funkelab/daisyBlock-wise task scheduling for large nD volumes.
Python MIT License UpdatedJun 21, 2024 -
paintera Public
Forked from saalfeldlab/painteraJava GNU General Public License v2.0 UpdatedMay 24, 2024 -
staged-recipes Public
Forked from conda-forge/staged-recipesA place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 27, 2024 -
A "batteries-included" distribution of ImageJ 🔋
Shell GNU General Public License v3.0 UpdatedFeb 27, 2024 -
gunpowder Public
Forked from funkelab/gunpowderA library to facilitate machine learning on multi-dimensional images.
Python MIT License UpdatedFeb 14, 2024 -
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neuroglancer Public
Forked from google/neuroglancerWebGL-based viewer for volumetric data
TypeScript Apache License 2.0 UpdatedSep 26, 2023 -
fibsem-tools Public
Forked from janelia-cellmap/fibsem-toolsTools for handling FIB-SEM data and annotations
Python MIT License UpdatedJun 29, 2023 -
HelloTornadoFx Public
First demos in learning TornadoFx and Kotlin ( TornadoFx is the clean baby of JavaFx written in Kotlin)
Kotlin UpdatedMay 23, 2023 -
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element-array-ephys Public
Forked from datajoint/element-array-ephysDataJoint Element for Neuropixels analysis with Kilosort
Python MIT License UpdatedApr 28, 2023 -
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cremi_python Public
Forked from cremi/cremi_pythonPython scripts to read and write the CREMI hdf5 file format.
Python UpdatedMar 21, 2023 -
zarr-python Public
Forked from zarr-developers/zarr-pythonAn implementation of chunked, compressed, N-dimensional arrays for Python.
Python MIT License UpdatedFeb 14, 2023 -
radialsymmetrylocalization-hips Public
Forked from ida-mdc/radialsymmetrylocalization-hipsShell Apache License 2.0 UpdatedFeb 10, 2023