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DataHarmonizer Public Forked from cidgoh/DataHarmonizer
A standardized browser-based spreadsheet editor and validator that can be run offline and locally, which works of of LinkML data specifications.

microbiomedata/DataHarmonizer’s past year of commit activity

JavaScript 1 MIT 32 0 3 Updated Jan 22, 2026
metaAssembly Public
Workflow for metagenome assembly

microbiomedata/metaAssembly’s past year of commit activity

WDL 4 4 2 0 Updated Jan 22, 2026
nmdc-server Public
Data portal client and server for NMDC.

microbiomedata/nmdc-server’s past year of commit activity

Python 12 0 122 26 Updated Jan 22, 2026
enviroMS Public
EnviroMS is a workflow for natural organic matter data processing and annotation

microbiomedata/enviroMS’s past year of commit activity

Python 5 BSD-2-Clause 0 3 0 Updated Jan 21, 2026
ReadsQC Public
This workflow is a replicate of the QA protocol implemented at JGI for Illumina reads

microbiomedata/ReadsQC’s past year of commit activity

WDL 3 6 3 3 Updated Jan 21, 2026
nmdc_automation Public
Prototype automation

microbiomedata/nmdc_automation’s past year of commit activity

Python 2 2 57 9 Updated Jan 21, 2026
nmdc-runtime Public
Runtime system for NMDC data management and orchestration

microbiomedata/nmdc-runtime’s past year of commit activity

Python 7 6 127 (3 issues need help) 8 Updated Jan 21, 2026
nmdc_mass_spectrometry_metadata_generation Public
Mass spectrometry metadata generation

microbiomedata/nmdc_mass_spectrometry_metadata_generation’s past year of commit activity

Python 2 0 4 1 Updated Jan 21, 2026
submission-schema Public
The NMDC submission schema

microbiomedata/submission-schema’s past year of commit activity

Python 1 MIT 3 26 3 Updated Jan 21, 2026
nmdc-schema Public
National Microbiome Data Collaborative (NMDC) unified data model

microbiomedata/nmdc-schema’s past year of commit activity

Python 44 CC0-1.0 9 352 (4 issues need help) 10 Updated Jan 21, 2026

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