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MAterials Simulation Toolkit for Machine Learning (MAST-ML)

Jupyter Notebook 126 61 Updated Oct 10, 2025

Interaction Fingerprints for protein-ligand complexes and more

Python 447 87 Updated Aug 27, 2025

Things that you should (and should not) do in your Materials Informatics research.

Jupyter Notebook 194 77 Updated Nov 17, 2023

Lightning-UQ-Box: Uncertainty Quantification for Neural Networks with PyTorch and Lightning

Python 203 22 Updated Oct 15, 2025

Official PyTorch implementation for the paper "CARD: Classification and Regression Diffusion Models"

Python 232 40 Updated Mar 21, 2023

Explainer for black box models that predict molecule properties

Jupyter Notebook 339 46 Updated May 8, 2025

MatterSim: A deep learning atomistic model across elements, temperatures and pressures.

Jupyter Notebook 470 62 Updated Jul 6, 2025

Official implementation of "Gradient Boosted and Statistical Feature Selection Pipeline for Materials Property Predictions"

Jupyter Notebook 13 1 Updated Feb 29, 2024

Official implementation of MatterGen -- a generative model for inorganic materials design across the periodic table that can be fine-tuned to steer the generation towards a wide range of property c…

Python 1,526 280 Updated Oct 6, 2025

Evidential Deep Learning in PyTorch

Python 64 7 Updated Sep 27, 2022

PyTorch implementation of "Weight Uncertainty in Neural Networks"

Jupyter Notebook 176 46 Updated Apr 12, 2022

Laplace approximations for Deep Learning.

Python 522 83 Updated Apr 22, 2025

Uncertainty Toolbox: a Python toolbox for predictive uncertainty quantification, calibration, metrics, and visualization

Python 1,936 144 Updated Mar 5, 2025

A Python Package to Tackle the Curse of Imbalanced Datasets in Machine Learning

Python 7,049 1,318 Updated Aug 26, 2025

Applicability domains for cheminformatics models

Python 4 1 Updated Apr 17, 2024

Practical Cheminformatics Tutorials

Jupyter Notebook 1,103 194 Updated Oct 22, 2025
Jupyter Notebook 56 5 Updated Jul 13, 2025

The official code repository for the second edition of the O'Reilly book Generative Deep Learning: Teaching Machines to Paint, Write, Compose and Play.

Jupyter Notebook 1,398 549 Updated Jun 2, 2024

AI molecular design tool for de novo design, scaffold hopping, R-group replacement, linker design and molecule optimization.

Python 589 172 Updated Oct 22, 2025

Refined and extended version of ChemTS

Python 114 28 Updated Aug 17, 2025

PDBFixer fixes problems in PDB files

Python 594 126 Updated Sep 22, 2025

Molecular Processing Made Easy.

Python 514 55 Updated Jun 10, 2024

Molecule Validation and Standardization

Python 175 57 Updated Apr 16, 2020

TeachOpenCADD: a teaching platform for computer-aided drug design (CADD) using open source packages and data

Jupyter Notebook 922 216 Updated Oct 23, 2025